RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 HSP90AB3PQ58FF7 597 aa27.79■■■□□ 2.04
SNX22-205ENST00000560945 ANKRD36CQ5JPF3 1778 aa27.79■■■□□ 2.04
SNX22-205ENST00000560945 SYNE4Q8N205 404 aa27.79■■■□□ 2.04
SNX22-205ENST00000560945 ZNF34Q8IZ26 560 aa27.78■■■□□ 2.04
SNX22-205ENST00000560945 APBA3O96018 575 aa27.78■■■□□ 2.04
SNX22-205ENST00000560945 FAM89AQ96GI7 184 aa27.78■■■□□ 2.04
SNX22-205ENST00000560945 PA2G4Q9UQ80 394 aaKnown RBP27.78■■■□□ 2.04
SNX22-205ENST00000560945 HDAC5Q9UQL6 1122 aa27.78■■■□□ 2.04
SNX22-205ENST00000560945 TNS1Q9HBL0 1735 aaKnown RBP27.78■■■□□ 2.04
SNX22-205ENST00000560945 FOXO4P98177 505 aa27.77■■■□□ 2.04
SNX22-205ENST00000560945 TXNRD1Q16881 649 aa27.77■■■□□ 2.04
SNX22-205ENST00000560945 SRP68Q9UHB9 627 aaKnown RBP27.76■■■□□ 2.04
SNX22-205ENST00000560945 C16orf71Q8IYS4 520 aaPredicted RBP27.76■■■□□ 2.03
SNX22-205ENST00000560945 TSHZ2Q9NRE2 1034 aa27.76■■■□□ 2.03
SNX22-205ENST00000560945 RTCBQ9Y3I0 505 aaKnown RBP27.76■■■□□ 2.03
SNX22-205ENST00000560945 BCORQ6W2J9 1755 aa27.76■■■□□ 2.03
SNX22-205ENST00000560945 SURF6O75683 361 aaKnown RBP27.75■■■□□ 2.03
SNX22-205ENST00000560945 PHF14O94880 888 aa27.75■■■□□ 2.03
SNX22-205ENST00000560945 PCCAP05165 728 aaPredicted RBP27.74■■■□□ 2.03
SNX22-205ENST00000560945 RABL6Q3YEC7 729 aaPredicted RBP27.74■■■□□ 2.03
SNX22-205ENST00000560945 SLC27A3Q5K4L6 730 aa27.74■■■□□ 2.03
SNX22-205ENST00000560945 AK7Q96M32 723 aa27.74■■■□□ 2.03
SNX22-205ENST00000560945 BCL2L12Q9HB09 334 aa27.74■■■□□ 2.03
SNX22-205ENST00000560945 ZBTB38Q8NAP3 1195 aaPredicted RBP27.74■■■□□ 2.03
SNX22-205ENST00000560945 KLHDC4Q8TBB5 520 aa27.74■■■□□ 2.03
SNX22-205ENST00000560945 FAM177BA6PVY3 158 aa27.73■■■□□ 2.03
SNX22-205ENST00000560945 SUSD4Q5VX71 490 aa27.73■■■□□ 2.03
SNX22-205ENST00000560945 USPL1Q5W0Q7 1092 aa27.73■■■□□ 2.03
SNX22-205ENST00000560945 LMBR1LQ6UX01 489 aa27.73■■■□□ 2.03
SNX22-205ENST00000560945 OTUD7AQ8TE49 926 aaPredicted RBP27.73■■■□□ 2.03
SNX22-205ENST00000560945 ARHGEF1Q92888 912 aaKnown RBP27.73■■■□□ 2.03
SNX22-205ENST00000560945 NIP7Q9Y221 180 aaKnown RBP eCLIP27.71■■■□□ 2.03
SNX22-205ENST00000560945 SCN7AQ01118 1682 aa27.71■■■□□ 2.03
SNX22-205ENST00000560945 PLSCR1O15162 318 aa27.71■■■□□ 2.03
SNX22-205ENST00000560945 NARFQ9UHQ1 456 aa27.71■■■□□ 2.03
SNX22-205ENST00000560945 TRMT112Q9UI30 125 aaKnown RBP27.71■■■□□ 2.03
SNX22-205ENST00000560945 RFX5P48382 616 aaPredicted RBP27.7■■■□□ 2.02
SNX22-205ENST00000560945 NOP58Q9Y2X3 529 aaKnown RBP27.69■■■□□ 2.02
SNX22-205ENST00000560945 LRRCC1Q9C099 1032 aa27.69■■■□□ 2.02
SNX22-205ENST00000560945 IL1RAPL2Q9NP60 686 aa27.68■■■□□ 2.02
SNX22-205ENST00000560945 CHMP3Q9Y3E7 222 aa27.68■■■□□ 2.02
SNX22-205ENST00000560945 C4AP0C0L4 1744 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 TBC1D9BQ66K14 1250 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 BICDL1Q6ZP65 573 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 SIL1Q9H173 461 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 ZNF652Q9Y2D9 606 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 CDHR2Q9BYE9 1310 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 TRAPPC3LQ5T215 181 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 CLEC4GQ6UXB4 293 aa27.67■■■□□ 2.02
SNX22-205ENST00000560945 CCDC85AQ96PX6 553 aaPredicted RBP27.67■■■□□ 2.02
SNX22-205ENST00000560945 ZBTB47Q9UFB7 747 aaPredicted RBP27.67■■■□□ 2.02
SNX22-205ENST00000560945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.66■■■□□ 2.02
SNX22-205ENST00000560945 RHPN1Q8TCX5 695 aa27.66■■■□□ 2.02
SNX22-205ENST00000560945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.66■■■□□ 2.02
SNX22-205ENST00000560945 UBR3Q6ZT12 1888 aa27.65■■■□□ 2.02
SNX22-205ENST00000560945 IRS4O14654 1257 aaPredicted RBP27.65■■■□□ 2.02
SNX22-205ENST00000560945 ZPR1O75312 459 aa27.65■■■□□ 2.02
SNX22-205ENST00000560945 PTPN12Q05209 780 aaKnown RBP27.65■■■□□ 2.02
SNX22-205ENST00000560945 ZNF827Q17R98 1081 aa27.65■■■□□ 2.02
SNX22-205ENST00000560945 PLEKHM2Q8IWE5 1019 aa27.65■■■□□ 2.02
SNX22-205ENST00000560945 USP42Q9H9J4 1324 aaKnown RBP27.65■■■□□ 2.02
SNX22-205ENST00000560945 RAB11FIP3O75154 756 aa27.64■■■□□ 2.02
SNX22-205ENST00000560945 NTSR2O95665 410 aa27.64■■■□□ 2.02
SNX22-205ENST00000560945 UTP14AQ9BVJ6 771 aaKnown RBP27.64■■■□□ 2.02
SNX22-205ENST00000560945 PLA2G12BQ9BX93 195 aa27.64■■■□□ 2.02
SNX22-205ENST00000560945 RFC4P35249 363 aa27.64■■■□□ 2.01
SNX22-205ENST00000560945 SF3B2Q13435 895 aaKnown RBP27.64■■■□□ 2.01
SNX22-205ENST00000560945 OS9Q13438 667 aaPredicted RBP27.64■■■□□ 2.01
SNX22-205ENST00000560945 PARP10Q53GL7 1025 aa27.64■■■□□ 2.01
SNX22-205ENST00000560945 RGPD3A6NKT7 1758 aaPredicted RBP27.64■■■□□ 2.01
SNX22-205ENST00000560945 RGPD4Q7Z3J3 1758 aa27.64■■■□□ 2.01
SNX22-205ENST00000560945 NUTM1Q86Y26 1132 aa27.63■■■□□ 2.01
SNX22-205ENST00000560945 HCLS1P14317 486 aaPredicted RBP27.62■■■□□ 2.01
SNX22-205ENST00000560945 SASH1O94885 1247 aa27.62■■■□□ 2.01
SNX22-205ENST00000560945 FAM161AQ3B820 660 aa27.62■■■□□ 2.01
SNX22-205ENST00000560945 C8orf34Q49A92 452 aa27.62■■■□□ 2.01
SNX22-205ENST00000560945 KIF1BPQ96EK5 621 aa27.62■■■□□ 2.01
SNX22-205ENST00000560945 ZNF594Q96JF6 807 aaPredicted RBP27.62■■■□□ 2.01
SNX22-205ENST00000560945 COPRSQ9NQ92 184 aa27.62■■■□□ 2.01
SNX22-205ENST00000560945 SH3TC1Q8TE82 1336 aa27.61■■■□□ 2.01
SNX22-205ENST00000560945 CSF1RP07333 972 aa27.6■■■□□ 2.01
SNX22-205ENST00000560945 HSP90AB4PQ58FF6 505 aa27.6■■■□□ 2.01
SNX22-205ENST00000560945 SALL3Q9BXA9 1300 aa27.6■■■□□ 2.01
SNX22-205ENST00000560945 CTSWP56202 376 aa27.6■■■□□ 2.01
SNX22-205ENST00000560945 G3BP1Q13283 466 aaKnown RBP eCLIP27.6■■■□□ 2.01
SNX22-205ENST00000560945 TTLL11Q8NHH1 800 aa27.6■■■□□ 2.01
SNX22-205ENST00000560945 EN1Q05925 392 aaPredicted RBP27.59■■■□□ 2.01
SNX22-205ENST00000560945 EZH2Q15910 746 aaKnown RBP27.59■■■□□ 2.01
SNX22-205ENST00000560945 TSHZ3Q63HK5 1081 aa27.59■■■□□ 2.01
SNX22-205ENST00000560945 AKT1S1Q96B36 256 aa27.59■■■□□ 2.01
SNX22-205ENST00000560945 RGL2O15211 777 aa27.58■■■□□ 2.01
SNX22-205ENST00000560945 PDE8AO60658 829 aa27.58■■■□□ 2.01
SNX22-205ENST00000560945 ADRA2BP18089 450 aa27.58■■■□□ 2.01
SNX22-205ENST00000560945 SSFA2P28290 1259 aa27.58■■■□□ 2.01
SNX22-205ENST00000560945 BACH2Q9BYV9 841 aa27.58■■■□□ 2.01
SNX22-205ENST00000560945 GREM2Q9H772 168 aa27.57■■■□□ 2
SNX22-205ENST00000560945 ERFEQ4G0M1 354 aa27.57■■■□□ 2
SNX22-205ENST00000560945 GSPT1P15170 499 aaKnown RBP27.56■■■□□ 2
SNX22-205ENST00000560945 BAG6P46379 1132 aa27.55■■■□□ 2
SNX22-205ENST00000560945 DDX60Q8IY21 1712 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms