RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 TIAM2Q8IVF5 1701 aa25.9■■□□□ 1.74
IPO4-215ENST00000560935 RNF123Q5XPI4 1314 aa25.89■■□□□ 1.74
IPO4-215ENST00000560935 TCIRG1Q13488 830 aa25.89■■□□□ 1.74
IPO4-215ENST00000560935 ANKRD13DQ6ZTN6 518 aa25.89■■□□□ 1.74
IPO4-215ENST00000560935 C8orf58Q8NAV2 365 aa25.89■■□□□ 1.74
IPO4-215ENST00000560935 TAOK3Q9H2K8 898 aa25.89■■□□□ 1.74
IPO4-215ENST00000560935 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 LTBP3Q9NS15 1303 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 PRELPP51888 382 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 CCDC93Q567U6 631 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 NLRP10Q86W26 655 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 RPGRQ92834 1020 aaKnown RBP25.88■■□□□ 1.73
IPO4-215ENST00000560935 IL16Q14005 1332 aa25.88■■□□□ 1.73
IPO4-215ENST00000560935 KIF3CO14782 793 aa25.87■■□□□ 1.73
IPO4-215ENST00000560935 FAM9BQ8IZU0 186 aa25.87■■□□□ 1.73
IPO4-215ENST00000560935 TSR2Q969E8 191 aaKnown RBP25.87■■□□□ 1.73
IPO4-215ENST00000560935 C7orf43Q8WVR3 580 aa25.86■■□□□ 1.73
IPO4-215ENST00000560935 DICER1Q9UPY3 1922 aaKnown RBP25.86■■□□□ 1.73
IPO4-215ENST00000560935 CCDC30Q5VVM6 783 aa25.85■■□□□ 1.73
IPO4-215ENST00000560935 NLRP3Q96P20 1036 aa25.85■■□□□ 1.73
IPO4-215ENST00000560935 HOXA10P31260 410 aaPredicted RBP25.84■■□□□ 1.73
IPO4-215ENST00000560935 GOLGA2Q08379 1002 aa25.84■■□□□ 1.73
IPO4-215ENST00000560935 SLC10A5Q5PT55 438 aa25.84■■□□□ 1.73
IPO4-215ENST00000560935 RBM17Q96I25 401 aaKnown RBP25.84■■□□□ 1.73
IPO4-215ENST00000560935 NMRK2Q9NPI5 230 aa25.84■■□□□ 1.73
IPO4-215ENST00000560935 TRMT112Q9UI30 125 aaKnown RBP25.84■■□□□ 1.73
IPO4-215ENST00000560935 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
IPO4-215ENST00000560935 RTKN2Q8IZC4 609 aa25.82■■□□□ 1.72
IPO4-215ENST00000560935 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
IPO4-215ENST00000560935 PHAXQ9H814 394 aaKnown RBP25.82■■□□□ 1.72
IPO4-215ENST00000560935 SH3TC1Q8TE82 1336 aa25.82■■□□□ 1.72
IPO4-215ENST00000560935 RIC3Q7Z5B4 369 aa25.81■■□□□ 1.72
IPO4-215ENST00000560935 WDR63Q8IWG1 891 aa25.81■■□□□ 1.72
IPO4-215ENST00000560935 CRAMP1Q96RY5 1269 aa25.81■■□□□ 1.72
IPO4-215ENST00000560935 ISCA1Q9BUE6 129 aa25.81■■□□□ 1.72
IPO4-215ENST00000560935 FKBP4Q02790 459 aaKnown RBP eCLIP25.8■■□□□ 1.72
IPO4-215ENST00000560935 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
IPO4-215ENST00000560935 LAMB2P55268 1798 aa25.79■■□□□ 1.72
IPO4-215ENST00000560935 GLTPD2A6NH11 291 aa25.79■■□□□ 1.72
IPO4-215ENST00000560935 TWISTNBQ3B726 338 aaPredicted RBP25.79■■□□□ 1.72
IPO4-215ENST00000560935 OLFM4Q6UX06 510 aa25.79■■□□□ 1.72
IPO4-215ENST00000560935 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
IPO4-215ENST00000560935 ATP5J2-PTCD1G3V325 749 aa25.78■■□□□ 1.72
IPO4-215ENST00000560935 DDX58O95786 925 aaKnown RBP25.78■■□□□ 1.72
IPO4-215ENST00000560935 HCLS1P14317 486 aaPredicted RBP25.78■■□□□ 1.72
IPO4-215ENST00000560935 CC2D2BQ6DHV5 1058 aa25.78■■□□□ 1.72
IPO4-215ENST00000560935 C16orf71Q8IYS4 520 aaPredicted RBP25.78■■□□□ 1.72
IPO4-215ENST00000560935 FANCIQ9NVI1 1328 aa25.78■■□□□ 1.72
IPO4-215ENST00000560935 TOMM70O94826 608 aa25.77■■□□□ 1.72
IPO4-215ENST00000560935 DPY19L2Q6NUT2 758 aa25.77■■□□□ 1.72
IPO4-215ENST00000560935 RRAGCQ9HB90 399 aa25.77■■□□□ 1.72
IPO4-215ENST00000560935 PPEF1O14829 653 aaPredicted RBP25.76■■□□□ 1.71
IPO4-215ENST00000560935 TRIM28Q13263 835 aaKnown RBP25.76■■□□□ 1.71
IPO4-215ENST00000560935 SYNE4Q8N205 404 aa25.76■■□□□ 1.71
IPO4-215ENST00000560935 DDX60Q8IY21 1712 aaKnown RBP25.75■■□□□ 1.71
IPO4-215ENST00000560935 GRIPAP1Q4V328 841 aa25.75■■□□□ 1.71
IPO4-215ENST00000560935 ZNF428Q96B54 188 aa25.75■■□□□ 1.71
IPO4-215ENST00000560935 ZNF277Q9NRM2 450 aaPredicted RBP25.75■■□□□ 1.71
IPO4-215ENST00000560935 ABCC4O15439 1325 aa25.74■■□□□ 1.71
IPO4-215ENST00000560935 TMX4Q9H1E5 349 aaPredicted RBP25.74■■□□□ 1.71
IPO4-215ENST00000560935 SNED1Q8TER0 1413 aa25.73■■□□□ 1.71
IPO4-215ENST00000560935 DDX46Q7L014 1031 aaKnown RBP25.73■■□□□ 1.71
IPO4-215ENST00000560935 FAM89AQ96GI7 184 aa25.73■■□□□ 1.71
IPO4-215ENST00000560935 PSMD1Q99460 953 aa25.73■■□□□ 1.71
IPO4-215ENST00000560935 MYD88Q99836 296 aa25.73■■□□□ 1.71
IPO4-215ENST00000560935 TCERG1O14776 1098 aaKnown RBP25.72■■□□□ 1.71
IPO4-215ENST00000560935 IARSP41252 1262 aaKnown RBP25.71■■□□□ 1.71
IPO4-215ENST00000560935 RBM46Q8TBY0 533 aaKnown RBP25.71■■□□□ 1.71
IPO4-215ENST00000560935 METTL22Q9BUU2 404 aaPredicted RBP25.71■■□□□ 1.71
IPO4-215ENST00000560935 MYH16Q9H6N6 1097 aa25.71■■□□□ 1.71
IPO4-215ENST00000560935 WDR90Q96KV7 1748 aa25.71■■□□□ 1.71
IPO4-215ENST00000560935 VEGFAP15692 232 aaPredicted RBP25.7■■□□□ 1.7
IPO4-215ENST00000560935 CCDC191Q8NCU4 936 aa25.7■■□□□ 1.7
IPO4-215ENST00000560935 MAP3K2Q9Y2U5 619 aa25.7■■□□□ 1.7
IPO4-215ENST00000560935 BBOX1O75936 387 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 SLC4A2P04920 1241 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 HSP90B1P14625 803 aaKnown RBP25.69■■□□□ 1.7
IPO4-215ENST00000560935 HSPA6P17066 643 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 EXOSC9Q06265 439 aaKnown RBP25.69■■□□□ 1.7
IPO4-215ENST00000560935 RTL5Q5HYW3 569 aaPredicted RBP25.69■■□□□ 1.7
IPO4-215ENST00000560935 KSR2Q6VAB6 950 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 ZBTB38Q8NAP3 1195 aaPredicted RBP25.69■■□□□ 1.7
IPO4-215ENST00000560935 ATP6V0A2Q9Y487 856 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 CACNA1FO60840 1977 aa25.69■■□□□ 1.7
IPO4-215ENST00000560935 IRS4O14654 1257 aaPredicted RBP25.68■■□□□ 1.7
IPO4-215ENST00000560935 GRAPQ13588 217 aa25.68■■□□□ 1.7
IPO4-215ENST00000560935 GRAPLQ8TC17 118 aaPredicted RBP25.68■■□□□ 1.7
IPO4-215ENST00000560935 CWC25Q9NXE8 425 aaPredicted RBP25.68■■□□□ 1.7
IPO4-215ENST00000560935 PI4KAP2A4QPH2 592 aa25.67■■□□□ 1.7
IPO4-215ENST00000560935 PI4KAP1Q8N8J0 262 aa25.67■■□□□ 1.7
IPO4-215ENST00000560935 SPINK5Q9NQ38 1064 aaPredicted RBP25.67■■□□□ 1.7
IPO4-215ENST00000560935 VAMP4O75379 141 aa25.66■■□□□ 1.7
IPO4-215ENST00000560935 NEXNQ0ZGT2 675 aa25.66■■□□□ 1.7
IPO4-215ENST00000560935 SF3B3Q15393 1217 aaKnown RBP25.66■■□□□ 1.7
IPO4-215ENST00000560935 JDP2Q8WYK2 163 aa25.66■■□□□ 1.7
IPO4-215ENST00000560935 DDNO94850 711 aaPredicted RBP25.65■■□□□ 1.7
IPO4-215ENST00000560935 PCCAP05165 728 aaPredicted RBP25.65■■□□□ 1.7
IPO4-215ENST00000560935 G2E3Q7L622 706 aa25.65■■□□□ 1.7
IPO4-215ENST00000560935 TMC4Q7Z404 712 aa25.65■■□□□ 1.7
IPO4-215ENST00000560935 SLC51AQ86UW1 340 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms