RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 PRELPP51888 382 aa8.78□□□□□ -1
USP8-213ENST00000560885 RASSF7Q02833 373 aa8.78□□□□□ -1
USP8-213ENST00000560885 AKAP4Q5JQC9 854 aa8.78□□□□□ -1
USP8-213ENST00000560885 SULT6B1Q6IMI4 303 aa8.78□□□□□ -1
USP8-213ENST00000560885 DNAJC10Q8IXB1 793 aa8.78□□□□□ -1
USP8-213ENST00000560885 TTLL6Q8N841 843 aa8.78□□□□□ -1
USP8-213ENST00000560885 POLR3GLQ9BT43 218 aa8.78□□□□□ -1
USP8-213ENST00000560885 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
USP8-213ENST00000560885 NARFQ9UHQ1 456 aa8.78□□□□□ -1
USP8-213ENST00000560885 CACNA1SQ13698 1873 aa8.78□□□□□ -1
USP8-213ENST00000560885 ARFGEF2Q9Y6D5 1785 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 H0YIN7 160 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 NFIXQ14938 502 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 MORC1Q86VD1 984 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 VSIG10Q8N0Z9 540 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 PANK3Q9H999 370 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 SCN7AQ01118 1682 aa8.77□□□□□ -1.01
USP8-213ENST00000560885 SERPINB2P05120 415 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 IL13P35225 146 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 KCNK17Q96T54 332 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 LGR6Q9HBX8 967 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
USP8-213ENST00000560885 COL11A2P13942 1736 aaPredicted RBP8.76□□□□□ -1.01
USP8-213ENST00000560885 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
USP8-213ENST00000560885 SCN4AP35499 1836 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 POTECB2RU33 542 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 NFKBIEO00221 500 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 HSPA1AP0DMV8 641 aaKnown RBP8.75□□□□□ -1.01
USP8-213ENST00000560885 HSPA1BP0DMV9 641 aaKnown RBP8.75□□□□□ -1.01
USP8-213ENST00000560885 C2CD5Q86YS7 1000 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 BCL2L12Q9HB09 334 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 ZBTB1Q9Y2K1 713 aa8.75□□□□□ -1.01
USP8-213ENST00000560885 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
USP8-213ENST00000560885 PDE6BP35913 854 aa8.74□□□□□ -1.01
USP8-213ENST00000560885 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP8-213ENST00000560885 SLC39A6Q13433 755 aa8.74□□□□□ -1.01
USP8-213ENST00000560885 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
USP8-213ENST00000560885 CLSPNQ9HAW4 1339 aa8.74□□□□□ -1.01
USP8-213ENST00000560885 CARMIL3Q8ND23 1372 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 SLX4Q8IY92 1834 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 A0A087WZG4 1122 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 STARD3NLO95772 234 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 PTPN5P54829 565 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 EIF5P55010 431 aaKnown RBP8.73□□□□□ -1.01
USP8-213ENST00000560885 THSD4Q6ZMP0 1018 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 GPHNQ9NQX3 736 aaPredicted RBP8.73□□□□□ -1.01
USP8-213ENST00000560885 KNSTRNQ9Y448 316 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
USP8-213ENST00000560885 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
USP8-213ENST00000560885 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
USP8-213ENST00000560885 ERFEQ4G0M1 354 aa8.72□□□□□ -1.01
USP8-213ENST00000560885 TTC5Q8N0Z6 440 aa8.72□□□□□ -1.01
USP8-213ENST00000560885 TEX13AQ9BXU3 409 aaPredicted RBP8.72□□□□□ -1.01
USP8-213ENST00000560885 C21orf2O43822 256 aa8.71□□□□□ -1.02
USP8-213ENST00000560885 HMOX1P09601 288 aa8.71□□□□□ -1.02
USP8-213ENST00000560885 HSPA5P11021 654 aaKnown RBP8.71□□□□□ -1.02
USP8-213ENST00000560885 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
USP8-213ENST00000560885 TBC1D9BQ66K14 1250 aa8.71□□□□□ -1.02
USP8-213ENST00000560885 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
USP8-213ENST00000560885 ZNF622Q969S3 477 aaKnown RBP eCLIP8.71□□□□□ -1.021e-9■■■■□ 24.8
USP8-213ENST00000560885 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
USP8-213ENST00000560885 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
USP8-213ENST00000560885 SOGA3Q5TF21 947 aa8.7□□□□□ -1.02
USP8-213ENST00000560885 PRR5LQ6MZQ0 368 aa8.7□□□□□ -1.02
USP8-213ENST00000560885 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
USP8-213ENST00000560885 TAOK3Q9H2K8 898 aa8.7□□□□□ -1.02
USP8-213ENST00000560885 IQCA1LA6NCM1 817 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 DIAPH1O60610 1272 aaKnown RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 PPP1R37O75864 691 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 DDNO94850 711 aaPredicted RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 IL6STP40189 918 aaPredicted RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 TEFQ10587 303 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 STYK1Q6J9G0 422 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 ZNF790Q6PG37 636 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 ZNF496Q96IT1 587 aaPredicted RBP8.69□□□□□ -1.02
USP8-213ENST00000560885 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
USP8-213ENST00000560885 ADAMTSL1Q8N6G6 1762 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 GOLGA8CPA6NN73 597 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 SRGNP10124 158 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 ST5P78524 1137 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 PRPF40BQ6NWY9 871 aaKnown RBP8.68□□□□□ -1.02
USP8-213ENST00000560885 CNBD1Q8NA66 436 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
USP8-213ENST00000560885 TBC1D2BQ9UPU7 963 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 CNTNAP1P78357 1384 aa8.68□□□□□ -1.02
USP8-213ENST00000560885 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 NPHP1O15259 732 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 LDHDQ86WU2 507 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 CCDC24Q8N4L8 307 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 MRPL50Q8N5N7 158 aaKnown RBP8.67□□□□□ -1.02
USP8-213ENST00000560885 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 MASTLQ96GX5 879 aa8.67□□□□□ -1.02
USP8-213ENST00000560885 FMNL2Q96PY5 1086 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms