RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
CPNE6-219ENST00000560884 NPR1P16066 1061 aa16.97■□□□□ 0.31
CPNE6-219ENST00000560884 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
CPNE6-219ENST00000560884 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
CPNE6-219ENST00000560884 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
CPNE6-219ENST00000560884 TAF1P21675 1872 aa16.97■□□□□ 0.31
CPNE6-219ENST00000560884 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 NFKBIEO00221 500 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 PRELPP51888 382 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 RASSF7Q02833 373 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 CNKSR1Q969H4 720 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
CPNE6-219ENST00000560884 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
CPNE6-219ENST00000560884 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
CPNE6-219ENST00000560884 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
CPNE6-219ENST00000560884 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
CPNE6-219ENST00000560884 C21orf2O43822 256 aa16.94■□□□□ 0.3
CPNE6-219ENST00000560884 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
CPNE6-219ENST00000560884 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
CPNE6-219ENST00000560884 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
CPNE6-219ENST00000560884 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 MYH3P11055 1940 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 COL4A1P02462 1669 aa16.93■□□□□ 0.3
CPNE6-219ENST00000560884 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
CPNE6-219ENST00000560884 TCERG1O14776 1098 aaKnown RBP16.92■□□□□ 0.3
CPNE6-219ENST00000560884 VAMP4O75379 141 aa16.92■□□□□ 0.3
CPNE6-219ENST00000560884 HOXA10P31260 410 aaPredicted RBP16.92■□□□□ 0.3
CPNE6-219ENST00000560884 TRIM28Q13263 835 aaKnown RBP16.92■□□□□ 0.3
CPNE6-219ENST00000560884 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
CPNE6-219ENST00000560884 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
CPNE6-219ENST00000560884 LTBP3Q9NS15 1303 aa16.92■□□□□ 0.3
CPNE6-219ENST00000560884 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
CPNE6-219ENST00000560884 G2E3Q7L622 706 aa16.91■□□□□ 0.3
CPNE6-219ENST00000560884 STK31Q9BXU1 1019 aa16.91■□□□□ 0.3
CPNE6-219ENST00000560884 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
CPNE6-219ENST00000560884 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
CPNE6-219ENST00000560884 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
CPNE6-219ENST00000560884 LMNB1P20700 586 aa16.9■□□□□ 0.3
CPNE6-219ENST00000560884 RIC3Q7Z5B4 369 aa16.9■□□□□ 0.3
CPNE6-219ENST00000560884 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
CPNE6-219ENST00000560884 HCLS1P14317 486 aaPredicted RBP16.89■□□□□ 0.29
CPNE6-219ENST00000560884 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
CPNE6-219ENST00000560884 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
CPNE6-219ENST00000560884 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
CPNE6-219ENST00000560884 SLC51AQ86UW1 340 aa16.89■□□□□ 0.29
CPNE6-219ENST00000560884 RPGRQ92834 1020 aaKnown RBP16.89■□□□□ 0.29
CPNE6-219ENST00000560884 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
CPNE6-219ENST00000560884 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CPNE6-219ENST00000560884 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
CPNE6-219ENST00000560884 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 MIER1Q8N108 512 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 MYD88Q99836 296 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
CPNE6-219ENST00000560884 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
CPNE6-219ENST00000560884 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
CPNE6-219ENST00000560884 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
CPNE6-219ENST00000560884 ABCC4O15439 1325 aa16.87■□□□□ 0.29
CPNE6-219ENST00000560884 COL4A5P29400 1685 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 FLIIQ13045 1269 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
CPNE6-219ENST00000560884 WDR90Q96KV7 1748 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
CPNE6-219ENST00000560884 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
CPNE6-219ENST00000560884 E9PSI1 815 aa16.85■□□□□ 0.29
CPNE6-219ENST00000560884 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
CPNE6-219ENST00000560884 ZBTB38Q8NAP3 1195 aaPredicted RBP16.85■□□□□ 0.29
CPNE6-219ENST00000560884 PPEF1O14829 653 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-219ENST00000560884 PCCAP05165 728 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-219ENST00000560884 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
CPNE6-219ENST00000560884 CWC25Q9NXE8 425 aaPredicted RBP16.84■□□□□ 0.29
CPNE6-219ENST00000560884 IRS4O14654 1257 aaPredicted RBP16.83■□□□□ 0.28
CPNE6-219ENST00000560884 KIF3CO14782 793 aa16.83■□□□□ 0.28
CPNE6-219ENST00000560884 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
CPNE6-219ENST00000560884 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
CPNE6-219ENST00000560884 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
CPNE6-219ENST00000560884 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
CPNE6-219ENST00000560884 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
CPNE6-219ENST00000560884 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
CPNE6-219ENST00000560884 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
CPNE6-219ENST00000560884 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
CPNE6-219ENST00000560884 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
CPNE6-219ENST00000560884 PSMD1Q99460 953 aa16.82■□□□□ 0.28
CPNE6-219ENST00000560884 NMRK2Q9NPI5 230 aa16.82■□□□□ 0.28
CPNE6-219ENST00000560884 NEURL1BA8MQ27 555 aa16.81■□□□□ 0.28
CPNE6-219ENST00000560884 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
CPNE6-219ENST00000560884 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms