RNA–Protein interactions for RNA: ENST00000560836.1

TCF12-219, Transcript of transcription factor 12, humanhuman

TSL 3

Gene TCF12, Length 212 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-219ENST00000560836 CCDC93Q567U6 631 aa13.71□□□□□ -0.21
TCF12-219ENST00000560836 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
TCF12-219ENST00000560836 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
TCF12-219ENST00000560836 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
TCF12-219ENST00000560836 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
TCF12-219ENST00000560836 LTBP3Q9NS15 1303 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
TCF12-219ENST00000560836 GLTPD2A6NH11 291 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 C8orf58Q8NAV2 365 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
TCF12-219ENST00000560836 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 HSPA6P17066 643 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 RTKN2Q8IZC4 609 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
TCF12-219ENST00000560836 RBM17Q96I25 401 aaKnown RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
TCF12-219ENST00000560836 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
TCF12-219ENST00000560836 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
TCF12-219ENST00000560836 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
TCF12-219ENST00000560836 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
TCF12-219ENST00000560836 TSR2Q969E8 191 aaKnown RBP13.68□□□□□ -0.22
TCF12-219ENST00000560836 DICER1Q9UPY3 1922 aaKnown RBP13.67□□□□□ -0.22
TCF12-219ENST00000560836 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
TCF12-219ENST00000560836 VEGFAP15692 232 aaPredicted RBP13.67□□□□□ -0.22
TCF12-219ENST00000560836 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
TCF12-219ENST00000560836 RBM46Q8TBY0 533 aaKnown RBP13.67□□□□□ -0.22
TCF12-219ENST00000560836 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
TCF12-219ENST00000560836 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
TCF12-219ENST00000560836 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
TCF12-219ENST00000560836 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
TCF12-219ENST00000560836 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
TCF12-219ENST00000560836 FAM9BQ8IZU0 186 aa13.66□□□□□ -0.22
TCF12-219ENST00000560836 TIAM2Q8IVF5 1701 aa13.66□□□□□ -0.22
TCF12-219ENST00000560836 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
TCF12-219ENST00000560836 DDNO94850 711 aaPredicted RBP13.65□□□□□ -0.22
TCF12-219ENST00000560836 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
TCF12-219ENST00000560836 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
TCF12-219ENST00000560836 POTECB2RU33 542 aa13.64□□□□□ -0.23
TCF12-219ENST00000560836 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
TCF12-219ENST00000560836 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
TCF12-219ENST00000560836 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
TCF12-219ENST00000560836 FSTL1Q12841 308 aa13.63□□□□□ -0.23
TCF12-219ENST00000560836 DDX46Q7L014 1031 aaKnown RBP13.63□□□□□ -0.23
TCF12-219ENST00000560836 PSMD1Q99460 953 aa13.63□□□□□ -0.23
TCF12-219ENST00000560836 ABCC4O15439 1325 aa13.63□□□□□ -0.23
TCF12-219ENST00000560836 IL16Q14005 1332 aa13.63□□□□□ -0.23
TCF12-219ENST00000560836 BBOX1O75936 387 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 APLP1P51693 650 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
TCF12-219ENST00000560836 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
TCF12-219ENST00000560836 GRIPAP1Q4V328 841 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
TCF12-219ENST00000560836 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 MYD88Q99836 296 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
TCF12-219ENST00000560836 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
TCF12-219ENST00000560836 DDX58O95786 925 aaKnown RBP13.61□□□□□ -0.23
TCF12-219ENST00000560836 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
TCF12-219ENST00000560836 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
TCF12-219ENST00000560836 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 TAF1P21675 1872 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 GRAPQ13588 217 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 WDR63Q8IWG1 891 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 SP8Q8IXZ3 490 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
TCF12-219ENST00000560836 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
TCF12-219ENST00000560836 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
TCF12-219ENST00000560836 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 LAMB2P55268 1798 aa13.6□□□□□ -0.23
TCF12-219ENST00000560836 WDR90Q96KV7 1748 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 FZD9O00144 591 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 KSR2Q6VAB6 950 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 ZBTB38Q8NAP3 1195 aaPredicted RBP13.59□□□□□ -0.23
TCF12-219ENST00000560836 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
TCF12-219ENST00000560836 PPIP5K2O43314 1243 aa13.58□□□□□ -0.24
TCF12-219ENST00000560836 HTRA3P83110 453 aa13.58□□□□□ -0.24
TCF12-219ENST00000560836 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms