RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	ABTB2	Q8N961	1025 aa		10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	PNN	Q9H307	717 aa	Known RBP	10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	MST1R	Q04912	1400 aa		10.14	□□□□□ -0.79
MARK3-222	ENST00000560731	LRRC7	Q96NW7	1537 aa		10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	MAP2	P11137	1827 aa	Known RBP	10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	PPM1G	O15355	546 aa	Predicted RBP	10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	CCDC27	Q2M243	656 aa		10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	KRT28	Q7Z3Y7	464 aa		10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	TRMT2A	Q8IZ69	625 aa	Known RBP	10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	TCP11L2	Q8N4U5	519 aa		10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	MSH6	P52701	1360 aa		10.13	□□□□□ -0.79
MARK3-222	ENST00000560731	APBB1	O00213	710 aa		10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	U2SURP	O15042	1029 aa	Known RBP	10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	WNT7B	P56706	349 aa		10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	ZNF787	Q6DD87	383 aa		10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	NUDT12	Q9BQG2	462 aa		10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	KIF24	Q5T7B8	1368 aa		10.12	□□□□□ -0.79
MARK3-222	ENST00000560731	MAP3K19	Q56UN5	1328 aa		10.11	□□□□□ -0.79
MARK3-222	ENST00000560731	CFAP99	D6REC4	459 aa		10.11	□□□□□ -0.79
MARK3-222	ENST00000560731	SLFN5	Q08AF3	891 aa		10.11	□□□□□ -0.79
MARK3-222	ENST00000560731	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.11	□□□□□ -0.79
MARK3-222	ENST00000560731	RNF123	Q5XPI4	1314 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	PIK3C2A	O00443	1686 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	USP54	Q70EL1	1684 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	TTC24	A2A3L6	582 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	CTDSPL2	Q05D32	466 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	EIF4A2	Q14240	407 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	DESI1	Q6ICB0	168 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	WDR63	Q8IWG1	891 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	WWC1	Q8IX03	1113 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	HELB	Q8NG08	1087 aa	Predicted RBP	10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	SNIP1	Q8TAD8	396 aa	Known RBP	10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	SBNO1	A3KN83	1393 aa		10.1	□□□□□ -0.79
MARK3-222	ENST00000560731	AVP	P01185	164 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	CCNYL3	P0C7X3	344 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	TMPO	P42166	694 aa	Known RBP	10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	PTPRN	Q16849	979 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	HSP90AB2P	Q58FF8	381 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	DUSP27	Q5VZP5	1158 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	NUTM2G	Q5VZR2	741 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	CRIPAK	Q8N1N5	446 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	KCNH5	Q8NCM2	988 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	GDPD2	Q9HCC8	539 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	SLAIN2	Q9P270	581 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	KIF1A	Q12756	1690 aa		10.09	□□□□□ -0.79
MARK3-222	ENST00000560731	XIRP1	Q702N8	1843 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-222	ENST00000560731		E9PSI1	815 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	AMPH	P49418	695 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	CTC1	Q2NKJ3	1217 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	HOMEZ	Q8IX15	550 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	PRR7	Q8TB68	274 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	GJD4	Q96KN9	370 aa	Predicted RBP	10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	IQSEC2	Q5JU85	1478 aa		10.08	□□□□□ -0.8
MARK3-222	ENST00000560731	USP19	O94966	1318 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	NPHP3	Q7Z494	1330 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	FLT4	P35916	1363 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	GC	P02774	474 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	XPC	Q01831	940 aa	Predicted RBP	10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	BRINP3	Q76B58	766 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	IP6K1	Q92551	441 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	TSC1	Q92574	1164 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	MRGPRX2	Q96LB1	330 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	PRM3	Q9NNZ6	103 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	HMX1	Q9NP08	348 aa	Predicted RBP	10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	AAAS	Q9NRG9	546 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	TBC1D2B	Q9UPU7	963 aa		10.07	□□□□□ -0.8
MARK3-222	ENST00000560731	HOXC9	P31274	260 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	PRKAR2B	P31323	418 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	RC3H1	Q5TC82	1133 aa	Known RBP	10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	ERICH6B	Q5W0A0	696 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	ARHGEF25	Q86VW2	580 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	PHACTR3	Q96KR7	559 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	RRP7A	Q9Y3A4	280 aa	Known RBP	10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	MARF1	Q9Y4F3	1742 aa	Known RBP	10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	MAPK8IP3	Q9UPT6	1336 aa		10.06	□□□□□ -0.8
MARK3-222	ENST00000560731	PEAK1	Q9H792	1746 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	RTL1	A6NKG5	1358 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	NEFL	P07196	543 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	NEFM	P07197	916 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	HMOX1	P09601	288 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	RIPK4	P57078	832 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	NFE2L2	Q16236	605 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	EVA1B	Q9NVM1	165 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	RCAN3	Q9UKA8	241 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	IL16	Q14005	1332 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	SPATA31A3	Q5VYP0	1347 aa		10.05	□□□□□ -0.8
MARK3-222	ENST00000560731	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	SLIT3	O75094	1523 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	NFAT5	O94916	1531 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	ABL2	P42684	1182 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	SMCP	P49901	116 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	SKOR1	P84550	965 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	SULT6B1	Q6IMI4	303 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	LRRN4	Q8WUT4	740 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	DDX17	Q92841	729 aa	Known RBP	10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	ARID3A	Q99856	593 aa		10.04	□□□□□ -0.8
MARK3-222	ENST00000560731	TRIM34	Q9BYJ4	488 aa		10.04	□□□□□ -0.8

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