RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CCDC8Q9H0W5 538 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 TJP1Q07157 1748 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 FOXO4P98177 505 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 CDC45O75419 566 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 GIGYF2Q6Y7W6 1299 aaKnown RBP13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
SNRPA1-211ENST00000560433 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 AACSQ86V21 672 aa13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 OSBPL3Q9H4L5 887 aa13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 TLR7Q9NYK1 1049 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 CLASRPQ8N2M8 674 aaKnown RBP13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 EAF2Q96CJ1 260 aaPredicted RBP13.37□□□□□ -0.27
SNRPA1-211ENST00000560433 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
SNRPA1-211ENST00000560433 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
SNRPA1-211ENST00000560433 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-211ENST00000560433 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-211ENST00000560433 TRPC5Q9UL62 973 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-211ENST00000560433 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-211ENST00000560433 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
SNRPA1-211ENST00000560433 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 TFCP2Q12800 502 aa13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 NLRP10Q86W26 655 aa13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 PUS3Q9BZE2 481 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
SNRPA1-211ENST00000560433 LRRC24Q50LG9 513 aa13.33□□□□□ -0.27
SNRPA1-211ENST00000560433 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.27
SNRPA1-211ENST00000560433 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.27
SNRPA1-211ENST00000560433 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-211ENST00000560433 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
SNRPA1-211ENST00000560433 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
SNRPA1-211ENST00000560433 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 IL25Q9H293 177 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 NUP98P52948 1817 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
SNRPA1-211ENST00000560433 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 GOLGB1Q14789 3259 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 PCCAP05165 728 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 TRIM28Q13263 835 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
SNRPA1-211ENST00000560433 ATRNO75882 1429 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 CAMTA2O94983 1202 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 TIMM10P62072 90 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 ATG9AQ7Z3C6 839 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 BTAF1O14981 1849 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 GREM2Q9H772 168 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 COL15A1P39059 1388 aa13.3□□□□□ -0.28
SNRPA1-211ENST00000560433 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 CHMLP26374 656 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 TNNI3KQ59H18 835 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 ZNF34Q8IZ26 560 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 DBNLQ9UJU6 430 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 FPGT-TNNI3KV9GXZ4 949 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 PHF14O94880 888 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 KIF2CQ99661 725 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
SNRPA1-211ENST00000560433 GNPATO15228 680 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 TRIM37O94972 964 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 CWC27Q6UX04 472 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 TTLL11Q8NHH1 800 aa13.28□□□□□ -0.28
SNRPA1-211ENST00000560433 TTC41PQ6P2S7 1318 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 ERC2O15083 957 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 ITGA6P23229 1130 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 CD2BP2O95400 341 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-211ENST00000560433 CHGBP05060 677 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms