RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SUCLG2Q96I99 432 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 COL15A1P39059 1388 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
CRTC3-209ENST00000560320 UBE3BQ7Z3V4 1068 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 ERC1Q8IUD2 1116 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 MYH3P11055 1940 aa13.13□□□□□ -0.31
CRTC3-209ENST00000560320 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 ITPK1Q13572 414 aa13.12□□□□□ -0.31
CRTC3-209ENST00000560320 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 ISCA1Q9BUE6 129 aa13.12□□□□□ -0.31
CRTC3-209ENST00000560320 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
CRTC3-209ENST00000560320 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
CRTC3-209ENST00000560320 H7C1W4 665 aa13.11□□□□□ -0.31
CRTC3-209ENST00000560320 G3BP1Q13283 466 aaKnown RBP eCLIP13.11□□□□□ -0.31
CRTC3-209ENST00000560320 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
CRTC3-209ENST00000560320 KIF1BPQ96EK5 621 aa13.11□□□□□ -0.31
CRTC3-209ENST00000560320 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
CRTC3-209ENST00000560320 BCORQ6W2J9 1755 aa13.11□□□□□ -0.31
CRTC3-209ENST00000560320 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
CRTC3-209ENST00000560320 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
CRTC3-209ENST00000560320 SMARCA5O60264 1052 aaPredicted RBP13.09□□□□□ -0.31
CRTC3-209ENST00000560320 EIF5BO60841 1220 aaKnown RBP13.09□□□□□ -0.31
CRTC3-209ENST00000560320 CAPN15O75808 1086 aa13.09□□□□□ -0.31
CRTC3-209ENST00000560320 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
CRTC3-209ENST00000560320 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
CRTC3-209ENST00000560320 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
CRTC3-209ENST00000560320 SYT17Q9BSW7 474 aa13.09□□□□□ -0.31
CRTC3-209ENST00000560320 NOP58Q9Y2X3 529 aaKnown RBP13.09□□□□□ -0.31
CRTC3-209ENST00000560320 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
CRTC3-209ENST00000560320 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
CRTC3-209ENST00000560320 HSPA6P17066 643 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 GPTP24298 496 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 PTGER2P43116 358 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
CRTC3-209ENST00000560320 RHPN1Q8TCX5 695 aa13.08□□□□□ -0.32
CRTC3-209ENST00000560320 JARID2Q92833 1246 aaPredicted RBP13.08□□□□□ -0.32
CRTC3-209ENST00000560320 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
CRTC3-209ENST00000560320 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.32
CRTC3-209ENST00000560320 CASP7P55210 303 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 HLFQ16534 295 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
CRTC3-209ENST00000560320 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
CRTC3-209ENST00000560320 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 CLASRPQ8N2M8 674 aaKnown RBP13.07□□□□□ -0.32
CRTC3-209ENST00000560320 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
CRTC3-209ENST00000560320 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
CRTC3-209ENST00000560320 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 RGL2O15211 777 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
CRTC3-209ENST00000560320 LMBR1LQ6UX01 489 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 AK7Q96M32 723 aa13.06□□□□□ -0.32
CRTC3-209ENST00000560320 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
CRTC3-209ENST00000560320 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
CRTC3-209ENST00000560320 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 GNPATO15228 680 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 ZPR1O75312 459 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 MX1P20591 662 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 SLC27A3Q5K4L6 730 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 CASC1Q6TDU7 716 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
CRTC3-209ENST00000560320 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
CRTC3-209ENST00000560320 AOX1Q06278 1338 aa13.05□□□□□ -0.32
CRTC3-209ENST00000560320 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
CRTC3-209ENST00000560320 PRELPP51888 382 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 FOXO4P98177 505 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 CCDC57Q2TAC2 916 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 FAM89AQ96GI7 184 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
CRTC3-209ENST00000560320 PDGFDQ9GZP0 370 aaPredicted RBP13.04□□□□□ -0.32
CRTC3-209ENST00000560320 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 PCDH10Q9P2E7 1040 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 LAMB2P55268 1798 aa13.04□□□□□ -0.32
CRTC3-209ENST00000560320 PDE8AO60658 829 aa13.03□□□□□ -0.32
CRTC3-209ENST00000560320 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms