RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MAP2K2P36507 400 aa17.27■□□□□ 0.36
RABGGTA-213ENST00000560127 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
RABGGTA-213ENST00000560127 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
RABGGTA-213ENST00000560127 RGL2O15211 777 aa17.26■□□□□ 0.35
RABGGTA-213ENST00000560127 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
RABGGTA-213ENST00000560127 MCOLN1Q9GZU1 580 aa17.26■□□□□ 0.35
RABGGTA-213ENST00000560127 U2SURPO15042 1029 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-213ENST00000560127 HLFQ16534 295 aa17.25■□□□□ 0.35
RABGGTA-213ENST00000560127 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-213ENST00000560127 POLR2AP24928 1970 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-213ENST00000560127 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
RABGGTA-213ENST00000560127 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 CC2D2BQ6DHV5 1058 aa17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 LAMB4A4D0S4 1761 aa17.24■□□□□ 0.35
RABGGTA-213ENST00000560127 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-213ENST00000560127 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-213ENST00000560127 SAPCD2Q86UD0 394 aa17.23■□□□□ 0.35
RABGGTA-213ENST00000560127 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
RABGGTA-213ENST00000560127 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-213ENST00000560127 CA12O43570 354 aa17.22■□□□□ 0.35
RABGGTA-213ENST00000560127 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
RABGGTA-213ENST00000560127 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-213ENST00000560127 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-213ENST00000560127 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-213ENST00000560127 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
RABGGTA-213ENST00000560127 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
RABGGTA-213ENST00000560127 AKAP11Q9UKA4 1901 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 DGKZQ13574 1117 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 HHIPL1Q96JK4 782 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
RABGGTA-213ENST00000560127 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 MCM10Q7L590 875 aa17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 RPGRQ92834 1020 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
RABGGTA-213ENST00000560127 CRAMP1Q96RY5 1269 aa17.17■□□□□ 0.34
RABGGTA-213ENST00000560127 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
RABGGTA-213ENST00000560127 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 CXCL9Q07325 125 aa17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 ZIC5Q96T25 663 aa17.16■□□□□ 0.34
RABGGTA-213ENST00000560127 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 LAMB2P55268 1798 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 AOC3Q16853 763 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 TAF1P21675 1872 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
RABGGTA-213ENST00000560127 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 NGEFQ8N5V2 710 aa17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 MAP3K15Q6ZN16 1313 aa17.14■□□□□ 0.33
RABGGTA-213ENST00000560127 GPTP24298 496 aa17.13■□□□□ 0.33
RABGGTA-213ENST00000560127 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-213ENST00000560127 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
RABGGTA-213ENST00000560127 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
RABGGTA-213ENST00000560127 ZNRF3Q9ULT6 936 aa17.13■□□□□ 0.33
RABGGTA-213ENST00000560127 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
RABGGTA-213ENST00000560127 NOGQ13253 232 aa17.12■□□□□ 0.33
RABGGTA-213ENST00000560127 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-213ENST00000560127 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-213ENST00000560127 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
RABGGTA-213ENST00000560127 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
RABGGTA-213ENST00000560127 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
RABGGTA-213ENST00000560127 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
RABGGTA-213ENST00000560127 NTSR2O95665 410 aa17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 SOX10P56693 466 aa17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 CDC37L1Q7L3B6 337 aa17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
RABGGTA-213ENST00000560127 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 HUNKP57058 714 aa17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 DLK2Q6UY11 383 aa17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-213ENST00000560127 ABCC4O15439 1325 aa17.08■□□□□ 0.32
RABGGTA-213ENST00000560127 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-213ENST00000560127 RAD17O75943 681 aa17.08■□□□□ 0.32
RABGGTA-213ENST00000560127 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
RABGGTA-213ENST00000560127 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
RABGGTA-213ENST00000560127 FAM155AB1AL88 458 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms