RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TOPAZ1Q8N9V7 1692 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 ARHGAP29Q52LW3 1261 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 CLIP2Q9UDT6 1046 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 AKAP12Q02952 1782 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 ORAI2Q96SN7 254 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 SUFUQ9UMX1 484 aa22.57■■□□□ 1.2
SEMA4B-215ENST00000560089 SDSP20132 328 aa22.56■■□□□ 1.2
SEMA4B-215ENST00000560089 PLA2G4DQ86XP0 818 aa22.56■■□□□ 1.2
SEMA4B-215ENST00000560089 CEP120Q8N960 986 aa22.56■■□□□ 1.2
SEMA4B-215ENST00000560089 ERC2O15083 957 aa22.56■■□□□ 1.2
SEMA4B-215ENST00000560089 KIF1CO43896 1103 aaKnown RBP22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 TRMT1Q9NXH9 659 aaKnown RBP22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 ANKRD26Q9UPS8 1709 aa22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 TDO2P48775 406 aa22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 LMAN1P49257 510 aa22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
SEMA4B-215ENST00000560089 CCDC144BQ3MJ40 725 aa22.54■■□□□ 1.2
SEMA4B-215ENST00000560089 FILIP1Q7Z7B0 1213 aa22.54■■□□□ 1.2
SEMA4B-215ENST00000560089 CCDC144CPQ8IYA2 1237 aa22.54■■□□□ 1.2
SEMA4B-215ENST00000560089 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 MNS1Q8NEH6 495 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 PHF8Q9UPP1 1060 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 GSCP56915 257 aaPredicted RBP22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 DNAJC21Q5F1R6 531 aaKnown RBP22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 LRRC8AQ8IWT6 810 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 IQUBQ8NA54 791 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 MRVI1Q9Y6F6 885 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
SEMA4B-215ENST00000560089 ACTN2P35609 894 aa22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 LRRN4CLQ8ND94 238 aa22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 UBXN6Q9BZV1 441 aa22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 TYRO3Q06418 890 aa22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 REXO1L1PQ8IX06 675 aa22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
SEMA4B-215ENST00000560089 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 FOXO3O43524 673 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 DIAPH1O60610 1272 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 MCTP2Q6DN12 878 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 CBX8Q9HC52 389 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 MED4Q9NPJ6 270 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 KIF2AO00139 706 aaPredicted RBP22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 CASTP20810 708 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 SUGP1Q8IWZ8 645 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 PPM1EQ8WY54 764 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 ELP1O95163 1332 aa22.51■■□□□ 1.19
SEMA4B-215ENST00000560089 IVLP07476 585 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 SKILP12757 684 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 SMC1AQ14683 1233 aaKnown RBP22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 SWT1Q5T5J6 900 aaKnown RBP22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 LEKR1Q6ZMV7 388 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 EXOC4Q96A65 974 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 HMOX1P09601 288 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 ZSCAN22P10073 491 aaPredicted RBP22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 L2HGDHQ9H9P8 463 aa22.5■■□□□ 1.19
SEMA4B-215ENST00000560089 TMEM94Q12767 1356 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 NEMFO60524 1076 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 SEC31AO94979 1220 aaKnown RBP22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 NLRP6P59044 892 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 EIF3CLB5ME19 914 aaKnown RBP22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 MAP3K11Q16584 847 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 EIF3CQ99613 913 aaKnown RBP22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 PSD3Q9NYI0 1048 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 ARID5BQ14865 1188 aa22.49■■□□□ 1.19
SEMA4B-215ENST00000560089 ATP8B1O43520 1251 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 MAP2K2P36507 400 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 ATP6V1AP38606 617 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 ANO6Q4KMQ2 910 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 CCAR2Q8N163 923 aaKnown RBP22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 ABTB2Q8N961 1025 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 DDX17Q92841 729 aaKnown RBP22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 ANKRD20A12PQ8NF67 263 aa22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 COL3A1P02461 1466 aaPredicted RBP22.48■■□□□ 1.19
SEMA4B-215ENST00000560089 NRKQ7Z2Y5 1582 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 PSME1Q06323 249 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 UBXN4Q92575 508 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 ADAM21Q9UKJ8 722 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 ANKARQ7Z5J8 1434 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 FAM212AQ96EL1 285 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 CCDC34Q96HJ3 373 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 ATP6V1DQ9Y5K8 247 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 RTL1A6NKG5 1358 aa22.47■■□□□ 1.19
SEMA4B-215ENST00000560089 SSH2Q76I76 1423 aa22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 ORC3Q9UBD5 711 aaPredicted RBP22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 MCCP23508 829 aa22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 CAMK4Q16566 473 aa22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 ZNF335Q9H4Z2 1342 aaPredicted RBP22.46■■□□□ 1.19
SEMA4B-215ENST00000560089 GOLIM4O00461 696 aa22.45■■□□□ 1.18
SEMA4B-215ENST00000560089 MMS22LQ6ZRQ5 1243 aa22.45■■□□□ 1.18
SEMA4B-215ENST00000560089 NUP62CLQ9H1M0 184 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms