RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 CLDN10P78369 228 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 TYRO3Q06418 890 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 ADGRE1Q14246 886 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 HDGFL1Q5TGJ6 251 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 KRTAP1-3Q8IUG1 177 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
CRNDE-208ENST00000560029 UBE2OQ9C0C9 1292 aaKnown RBP9.62□□□□□ -0.87
CRNDE-208ENST00000560029 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-208ENST00000560029 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
CRNDE-208ENST00000560029 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
CRNDE-208ENST00000560029 ANKIB1Q9P2G1 1089 aa9.61□□□□□ -0.87
CRNDE-208ENST00000560029 KCNQ4P56696 695 aa9.6□□□□□ -0.87
CRNDE-208ENST00000560029 C1orf53Q5VUE5 145 aa9.6□□□□□ -0.87
CRNDE-208ENST00000560029 TSEN2Q8NCE0 465 aaKnown RBP9.59□□□□□ -0.87
CRNDE-208ENST00000560029 TP53INP1Q96A56 240 aa9.59□□□□□ -0.87
CRNDE-208ENST00000560029 SLC6A14Q9UN76 642 aa9.59□□□□□ -0.87
CRNDE-208ENST00000560029 ELNP15502 786 aa9.58□□□□□ -0.88
CRNDE-208ENST00000560029 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
CRNDE-208ENST00000560029 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
CRNDE-208ENST00000560029 DMRTC2Q8IXT2 367 aaPredicted RBP9.58□□□□□ -0.88
CRNDE-208ENST00000560029 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
CRNDE-208ENST00000560029 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-208ENST00000560029 LENG1Q96BZ8 264 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-208ENST00000560029 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-208ENST00000560029 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
CRNDE-208ENST00000560029 USP21Q9UK80 565 aa9.57□□□□□ -0.88
CRNDE-208ENST00000560029 HYAL3O43820 417 aaPredicted RBP9.56□□□□□ -0.88
CRNDE-208ENST00000560029 H2AFB1P0C5Y9 115 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 H2AFB2P0C5Z0 115 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 AFF1P51825 1210 aaKnown RBP9.56□□□□□ -0.88
CRNDE-208ENST00000560029 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
CRNDE-208ENST00000560029 RAC1P63000 192 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 NRG1Q02297 640 aaPredicted RBP9.56□□□□□ -0.88
CRNDE-208ENST00000560029 PSAPL1Q6NUJ1 521 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 BTLAQ7Z6A9 289 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
CRNDE-208ENST00000560029 DNAJB12Q9NXW2 375 aaKnown RBP9.56□□□□□ -0.88
CRNDE-208ENST00000560029 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 C21orf2O43822 256 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
CRNDE-208ENST00000560029 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 SERPINA10Q9UK55 444 aa9.55□□□□□ -0.88
CRNDE-208ENST00000560029 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
CRNDE-208ENST00000560029 LRP8Q14114 963 aa9.54□□□□□ -0.88
CRNDE-208ENST00000560029 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
CRNDE-208ENST00000560029 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
CRNDE-208ENST00000560029 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
CRNDE-208ENST00000560029 LGR5O75473 907 aa9.53□□□□□ -0.88
CRNDE-208ENST00000560029 KRTAP4-12Q9BQ66 201 aa9.53□□□□□ -0.88
CRNDE-208ENST00000560029 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
CRNDE-208ENST00000560029 RGS9O75916 674 aaPredicted RBP9.52□□□□□ -0.89
CRNDE-208ENST00000560029 LCE3BQ5TA77 95 aa9.52□□□□□ -0.89
CRNDE-208ENST00000560029 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
CRNDE-208ENST00000560029 PNMA5Q96PV4 448 aa9.52□□□□□ -0.89
CRNDE-208ENST00000560029 UCN2Q96RP3 112 aa9.52□□□□□ -0.89
CRNDE-208ENST00000560029 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
CRNDE-208ENST00000560029 NFKB1P19838 968 aa9.51□□□□□ -0.89
CRNDE-208ENST00000560029 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
CRNDE-208ENST00000560029 SCG3Q8WXD2 468 aaKnown RBP9.51□□□□□ -0.89
CRNDE-208ENST00000560029 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.51□□□□□ -0.89
CRNDE-208ENST00000560029 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
CRNDE-208ENST00000560029 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
CRNDE-208ENST00000560029 CPB1P15086 417 aa9.5□□□□□ -0.89
CRNDE-208ENST00000560029 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
CRNDE-208ENST00000560029 SSBP4Q9BWG4 385 aaPredicted RBP9.5□□□□□ -0.89
CRNDE-208ENST00000560029 DKK1O94907 266 aa9.49□□□□□ -0.89
CRNDE-208ENST00000560029 IREB2P48200 963 aaKnown RBP9.49□□□□□ -0.89
CRNDE-208ENST00000560029 PLAURQ03405 335 aa9.49□□□□□ -0.89
CRNDE-208ENST00000560029 FAM35AQ86V20 835 aa9.49□□□□□ -0.89
CRNDE-208ENST00000560029 C2orf49Q9BVC5 232 aaPredicted RBP9.49□□□□□ -0.89
CRNDE-208ENST00000560029 M0R2N6 131 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 ATP9BO43861 1147 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 CCINQ13939 588 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 PPP1R12CQ9BZL4 782 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 TFIP11Q9UBB9 837 aaKnown RBP9.48□□□□□ -0.89
CRNDE-208ENST00000560029 BCS1LQ9Y276 419 aa9.48□□□□□ -0.89
CRNDE-208ENST00000560029 RFX1P22670 979 aa9.47□□□□□ -0.89
CRNDE-208ENST00000560029 MLLT1Q03111 559 aaPredicted RBP9.47□□□□□ -0.89
CRNDE-208ENST00000560029 ILDR2Q71H61 639 aa9.47□□□□□ -0.89
CRNDE-208ENST00000560029 SIX5Q8N196 739 aa9.47□□□□□ -0.89
CRNDE-208ENST00000560029 WFDC12Q8WWY7 111 aa9.47□□□□□ -0.89
CRNDE-208ENST00000560029 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.9
CRNDE-208ENST00000560029 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
CRNDE-208ENST00000560029 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.9
CRNDE-208ENST00000560029 NOS3P29474 1203 aa9.45□□□□□ -0.9
CRNDE-208ENST00000560029 CFAP70Q5T0N1 1121 aa9.45□□□□□ -0.9
CRNDE-208ENST00000560029 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
CRNDE-208ENST00000560029 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
CRNDE-208ENST00000560029 GRIK5Q16478 980 aa9.44□□□□□ -0.9
CRNDE-208ENST00000560029 PERM1Q5SV97 790 aa9.44□□□□□ -0.9
CRNDE-208ENST00000560029 LPIN3Q9BQK8 851 aa9.44□□□□□ -0.9
CRNDE-208ENST00000560029 ZFATQ9P243 1243 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms