RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LTBP1Q14766 1721 aa27.07■■□□□ 1.92
PSEN1-225ENST00000560005 LMOD1P29536 600 aaPredicted RBP27.07■■□□□ 1.92
PSEN1-225ENST00000560005 EIF6P56537 245 aaKnown RBP27.07■■□□□ 1.92
PSEN1-225ENST00000560005 MCM10Q7L590 875 aa27.07■■□□□ 1.92
PSEN1-225ENST00000560005 CAPNS2Q96L46 248 aa27.07■■□□□ 1.92
PSEN1-225ENST00000560005 THSD7BQ9C0I4 1608 aa27.06■■□□□ 1.92
PSEN1-225ENST00000560005 GRM1Q13255 1194 aa27.06■■□□□ 1.92
PSEN1-225ENST00000560005 MYBBP1AQ9BQG0 1328 aaKnown RBP27.06■■□□□ 1.92
PSEN1-225ENST00000560005 ABCC12Q96J65 1359 aa27.06■■□□□ 1.92
PSEN1-225ENST00000560005 BEGAINQ9BUH8 593 aa27.05■■□□□ 1.92
PSEN1-225ENST00000560005 CCDC85CA6NKD9 419 aa27.04■■□□□ 1.92
PSEN1-225ENST00000560005 ECE1P42892 770 aa27.04■■□□□ 1.92
PSEN1-225ENST00000560005 SCNN1DP51172 638 aa27.04■■□□□ 1.92
PSEN1-225ENST00000560005 CRY2Q49AN0 593 aa27.04■■□□□ 1.92
PSEN1-225ENST00000560005 CYP4F22Q6NT55 531 aa27.04■■□□□ 1.92
PSEN1-225ENST00000560005 RTF1Q92541 710 aaKnown RBP27.04■■□□□ 1.92
PSEN1-225ENST00000560005 EPS15P42566 896 aa27.03■■□□□ 1.92
PSEN1-225ENST00000560005 CC2D2BQ6DHV5 1058 aa27.03■■□□□ 1.92
PSEN1-225ENST00000560005 NUTM1Q86Y26 1132 aa27.03■■□□□ 1.92
PSEN1-225ENST00000560005 GPR101Q96P66 508 aaPredicted RBP27.03■■□□□ 1.92
PSEN1-225ENST00000560005 TRAF5O00463 557 aa27.01■■□□□ 1.91
PSEN1-225ENST00000560005 DCTN1Q14203 1278 aa27.01■■□□□ 1.91
PSEN1-225ENST00000560005 LARGE2Q8N3Y3 721 aa27.01■■□□□ 1.91
PSEN1-225ENST00000560005 NYXQ9GZU5 481 aa27.01■■□□□ 1.91
PSEN1-225ENST00000560005 MLLT1Q03111 559 aaPredicted RBP27■■□□□ 1.91
PSEN1-225ENST00000560005 CST9Q5W186 159 aa27■■□□□ 1.91
PSEN1-225ENST00000560005 RPGRQ92834 1020 aaKnown RBP27■■□□□ 1.91
PSEN1-225ENST00000560005 USP50Q70EL3 339 aaPredicted RBP26.99■■□□□ 1.91
PSEN1-225ENST00000560005 SLC51AQ86UW1 340 aa26.99■■□□□ 1.91
PSEN1-225ENST00000560005 NGEFQ8N5V2 710 aa26.99■■□□□ 1.91
PSEN1-225ENST00000560005 MRS2Q9HD23 443 aa26.99■■□□□ 1.91
PSEN1-225ENST00000560005 TSKSQ9UJT2 592 aa26.99■■□□□ 1.91
PSEN1-225ENST00000560005 CFAP53Q96M91 514 aa26.98■■□□□ 1.91
PSEN1-225ENST00000560005 TRPM7Q96QT4 1865 aa26.98■■□□□ 1.91
PSEN1-225ENST00000560005 CENPBP07199 599 aaPredicted RBP26.97■■□□□ 1.91
PSEN1-225ENST00000560005 HOXA10P31260 410 aaPredicted RBP26.97■■□□□ 1.91
PSEN1-225ENST00000560005 TLL2Q9Y6L7 1015 aa26.97■■□□□ 1.91
PSEN1-225ENST00000560005 TCERG1O14776 1098 aaKnown RBP26.96■■□□□ 1.91
PSEN1-225ENST00000560005 AOC2O75106 756 aa26.96■■□□□ 1.91
PSEN1-225ENST00000560005 LAMB4A4D0S4 1761 aa26.96■■□□□ 1.91
PSEN1-225ENST00000560005 U2AF1L5P0DN76 240 aaPredicted RBP26.95■■□□□ 1.9
PSEN1-225ENST00000560005 RGS19P49795 217 aa26.95■■□□□ 1.9
PSEN1-225ENST00000560005 U2AF1Q01081 240 aaKnown RBP eCLIP26.95■■□□□ 1.9
PSEN1-225ENST00000560005 GRIPAP1Q4V328 841 aa26.95■■□□□ 1.9
PSEN1-225ENST00000560005 NIM1KQ8IY84 436 aa26.95■■□□□ 1.9
PSEN1-225ENST00000560005 MIS18AQ9NYP9 233 aa26.95■■□□□ 1.9
PSEN1-225ENST00000560005 NUDCQ9Y266 331 aa26.95■■□□□ 1.9
PSEN1-225ENST00000560005 RIC1Q4ADV7 1423 aa26.94■■□□□ 1.9
PSEN1-225ENST00000560005 ERVV-1B6SEH8 477 aa26.94■■□□□ 1.9
PSEN1-225ENST00000560005 PPEF1O14829 653 aaPredicted RBP26.94■■□□□ 1.9
PSEN1-225ENST00000560005 GPTP24298 496 aa26.94■■□□□ 1.9
PSEN1-225ENST00000560005 NUP98P52948 1817 aa26.94■■□□□ 1.9
PSEN1-225ENST00000560005 MAP3K15Q6ZN16 1313 aa26.93■■□□□ 1.9
PSEN1-225ENST00000560005 MAP2K2P36507 400 aa26.93■■□□□ 1.9
PSEN1-225ENST00000560005 TAF7Q15545 349 aaPredicted RBP26.93■■□□□ 1.9
PSEN1-225ENST00000560005 UBN2Q6ZU65 1347 aa26.92■■□□□ 1.9
PSEN1-225ENST00000560005 TTLL7Q6ZT98 887 aa26.92■■□□□ 1.9
PSEN1-225ENST00000560005 RBM17Q96I25 401 aaKnown RBP26.92■■□□□ 1.9
PSEN1-225ENST00000560005 PPIP5K2O43314 1243 aa26.91■■□□□ 1.9
PSEN1-225ENST00000560005 HTATSF1O43719 755 aaKnown RBP26.91■■□□□ 1.9
PSEN1-225ENST00000560005 KIF6Q6ZMV9 814 aa26.91■■□□□ 1.9
PSEN1-225ENST00000560005 YTHDC1Q96MU7 727 aaKnown RBP26.91■■□□□ 1.9
PSEN1-225ENST00000560005 CRAMP1Q96RY5 1269 aa26.91■■□□□ 1.9
PSEN1-225ENST00000560005 ADARB2Q9NS39 739 aaKnown RBP26.91■■□□□ 1.9
PSEN1-225ENST00000560005 GPRC5DQ9NZD1 345 aa26.91■■□□□ 1.9
PSEN1-225ENST00000560005 IBTKQ9P2D0 1353 aaPredicted RBP26.91■■□□□ 1.9
PSEN1-225ENST00000560005 SUSD4Q5VX71 490 aa26.9■■□□□ 1.9
PSEN1-225ENST00000560005 SAPCD2Q86UD0 394 aa26.9■■□□□ 1.9
PSEN1-225ENST00000560005 RRP7AQ9Y3A4 280 aaKnown RBP26.9■■□□□ 1.9
PSEN1-225ENST00000560005 CELF2O95319 508 aaKnown RBP26.89■■□□□ 1.9
PSEN1-225ENST00000560005 AOC3Q16853 763 aa26.89■■□□□ 1.9
PSEN1-225ENST00000560005 C3orf67Q6ZVT6 689 aa26.89■■□□□ 1.9
PSEN1-225ENST00000560005 CFAP44Q96MT7 982 aa26.89■■□□□ 1.9
PSEN1-225ENST00000560005 ZBTB3Q9H5J0 574 aa26.89■■□□□ 1.9
PSEN1-225ENST00000560005 MCOLN1Q9GZU1 580 aa26.88■■□□□ 1.89
PSEN1-225ENST00000560005 MYL6BP14649 208 aa26.87■■□□□ 1.89
PSEN1-225ENST00000560005 CA12O43570 354 aa26.86■■□□□ 1.89
PSEN1-225ENST00000560005 NTSR2O95665 410 aa26.86■■□□□ 1.89
PSEN1-225ENST00000560005 CXCL9Q07325 125 aa26.86■■□□□ 1.89
PSEN1-225ENST00000560005 GLIS2Q9BZE0 524 aaPredicted RBP26.86■■□□□ 1.89
PSEN1-225ENST00000560005 GMPSP49915 693 aaPredicted RBP26.85■■□□□ 1.89
PSEN1-225ENST00000560005 ZNF34Q8IZ26 560 aa26.85■■□□□ 1.89
PSEN1-225ENST00000560005 TMX4Q9H1E5 349 aaPredicted RBP26.85■■□□□ 1.89
PSEN1-225ENST00000560005 CASP8AP2Q9UKL3 1982 aa26.85■■□□□ 1.89
PSEN1-225ENST00000560005 PPP2R1AP30153 589 aa26.84■■□□□ 1.89
PSEN1-225ENST00000560005 ZNF408Q9H9D4 720 aa26.84■■□□□ 1.89
PSEN1-225ENST00000560005 ZNRF3Q9ULT6 936 aa26.84■■□□□ 1.89
PSEN1-225ENST00000560005 ATP6V0A2Q9Y487 856 aa26.84■■□□□ 1.89
PSEN1-225ENST00000560005 KDM3BQ7LBC6 1761 aa26.84■■□□□ 1.89
PSEN1-225ENST00000560005 BRPF1P55201 1214 aaPredicted RBP26.83■■□□□ 1.89
PSEN1-225ENST00000560005 CCDC184Q52MB2 194 aa26.83■■□□□ 1.89
PSEN1-225ENST00000560005 HHIPL1Q96JK4 782 aa26.83■■□□□ 1.89
PSEN1-225ENST00000560005 VPS33BQ9H267 617 aa26.83■■□□□ 1.89
PSEN1-225ENST00000560005 PNISRQ8TF01 805 aaKnown RBP26.82■■□□□ 1.88
PSEN1-225ENST00000560005 NLRP3Q96P20 1036 aa26.82■■□□□ 1.88
PSEN1-225ENST00000560005 EIF4A1P60842 406 aaKnown RBP26.81■■□□□ 1.88
PSEN1-225ENST00000560005 PGAP2Q9UHJ9 254 aa26.81■■□□□ 1.88
PSEN1-225ENST00000560005 CIAPIN1Q6FI81 312 aa26.8■■□□□ 1.88
PSEN1-225ENST00000560005 GIGYF2Q6Y7W6 1299 aaKnown RBP26.8■■□□□ 1.88
PSEN1-225ENST00000560005 PPP1R42Q7Z4L9 355 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms