RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 NPR1P16066 1061 aa12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 IL13P35225 146 aa12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 EPS15P42566 896 aa12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 MTHFSDQ2M296 383 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 DZIP3Q86Y13 1208 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
SNRPA1-208ENST00000559686 COL4A5P29400 1685 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 PANK3Q9H999 370 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 TLL2Q9Y6L7 1015 aa12.19□□□□□ -0.46
SNRPA1-208ENST00000559686 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
SNRPA1-208ENST00000559686 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
SNRPA1-208ENST00000559686 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 CELF2O95319 508 aaKnown RBP12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 MAP2K2P36507 400 aa12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 SCNN1DP51172 638 aa12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 TEFQ10587 303 aa12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 SLC51AQ86UW1 340 aa12.17□□□□□ -0.46
SNRPA1-208ENST00000559686 ZNF790Q6PG37 636 aa12.16□□□□□ -0.46
SNRPA1-208ENST00000559686 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 KCNQ3O43525 872 aa12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 CA12O43570 354 aa12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 GTF2E1P29083 439 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 SAPCD2Q86UD0 394 aa12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNRPA1-208ENST00000559686 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
SNRPA1-208ENST00000559686 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-208ENST00000559686 TPTE2Q6XPS3 522 aa12.14□□□□□ -0.47
SNRPA1-208ENST00000559686 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-208ENST00000559686 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
SNRPA1-208ENST00000559686 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
SNRPA1-208ENST00000559686 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
SNRPA1-208ENST00000559686 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
SNRPA1-208ENST00000559686 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
SNRPA1-208ENST00000559686 PRPF38BQ5VTL8 546 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-208ENST00000559686 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
SNRPA1-208ENST00000559686 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 DLK2Q6UY11 383 aa12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 NUTM1Q86Y26 1132 aa12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 PSMD1Q99460 953 aa12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
SNRPA1-208ENST00000559686 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 PPIP5K2O43314 1243 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 HLFQ16534 295 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 AOC3Q16853 763 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 RPGRQ92834 1020 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
SNRPA1-208ENST00000559686 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 U2SURPO15042 1029 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 GMPSP49915 693 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 HUNKP57058 714 aa12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 CLEC4GQ6UXB4 293 aa12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
SNRPA1-208ENST00000559686 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-208ENST00000559686 TRPA1O75762 1119 aa12.08□□□□□ -0.48
SNRPA1-208ENST00000559686 NOGQ13253 232 aa12.08□□□□□ -0.48
SNRPA1-208ENST00000559686 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
SNRPA1-208ENST00000559686 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
SNRPA1-208ENST00000559686 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 CXCL9Q07325 125 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 TRPM4Q8TD43 1214 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
SNRPA1-208ENST00000559686 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 RAD17O75943 681 aa12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 GPTP24298 496 aa12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 HIRAP54198 1017 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
SNRPA1-208ENST00000559686 GABBR2O75899 941 aa12.05□□□□□ -0.48
SNRPA1-208ENST00000559686 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
SNRPA1-208ENST00000559686 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
SNRPA1-208ENST00000559686 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
SNRPA1-208ENST00000559686 NUP98P52948 1817 aa12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 HSPA5P11021 654 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 CRY2Q49AN0 593 aa12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 RGMBQ6NW40 437 aa12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 RNF186Q9NXI6 227 aa12.04□□□□□ -0.48
SNRPA1-208ENST00000559686 FAM155AB1AL88 458 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-208ENST00000559686 ZNF157P51786 506 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms