RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
SNRPA1-207ENST00000559309 DZIP1LQ8IYY4 767 aaKnown RBP18.79■□□□□ 0.6
SNRPA1-207ENST00000559309 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
SNRPA1-207ENST00000559309 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNRPA1-207ENST00000559309 ATP5J2-PTCD1G3V325 749 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 CENPBP07199 599 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 MS4A1P11836 297 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 GCKRQ14397 625 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 SUSD4Q5VX71 490 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 TMEM57Q8N5G2 664 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 ARXQ96QS3 562 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 SRCIN1Q9C0H9 1055 aa18.78■□□□□ 0.6
SNRPA1-207ENST00000559309 H7C1W4 665 aa18.77■□□□□ 0.6
SNRPA1-207ENST00000559309 SETDB2Q96T68 719 aa18.77■□□□□ 0.6
SNRPA1-207ENST00000559309 SUPT16HQ9Y5B9 1047 aaKnown RBP18.77■□□□□ 0.6
SNRPA1-207ENST00000559309 ANKRD31Q8N7Z5 1873 aa18.77■□□□□ 0.6
SNRPA1-207ENST00000559309 MSH5O43196 834 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 PCCAP05165 728 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 MMP10P09238 476 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 GPTP24298 496 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 PANK1Q8TE04 598 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 CWC25Q9NXE8 425 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 KIAA1551Q9HCM1 1747 aa18.76■□□□□ 0.59
SNRPA1-207ENST00000559309 CDHR2Q9BYE9 1310 aa18.75■□□□□ 0.59
SNRPA1-207ENST00000559309 MSL1Q68DK7 614 aa18.75■□□□□ 0.59
SNRPA1-207ENST00000559309 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
SNRPA1-207ENST00000559309 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 TNRC6CQ9HCJ0 1690 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 SERPINB2P05120 415 aa18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 SLC4A10Q6U841 1118 aa18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
SNRPA1-207ENST00000559309 KLRG2A4D1S0 409 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 UTP14AQ9BVJ6 771 aaKnown RBP18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 PLA2G12BQ9BX93 195 aa18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
SNRPA1-207ENST00000559309 ABCC12Q96J65 1359 aa18.72■□□□□ 0.59
SNRPA1-207ENST00000559309 GRM8O00222 908 aa18.72■□□□□ 0.59
SNRPA1-207ENST00000559309 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
SNRPA1-207ENST00000559309 KAZALD1Q96I82 304 aa18.72■□□□□ 0.59
SNRPA1-207ENST00000559309 FHDC1Q9C0D6 1143 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-207ENST00000559309 MYH3P11055 1940 aa18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 NBPF7P0C2Y1 421 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 TPTE2Q6XPS3 522 aa18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 FTSJ3Q8IY81 847 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 SH3TC1Q8TE82 1336 aa18.71■□□□□ 0.59
SNRPA1-207ENST00000559309 DLEC1Q9Y238 1755 aa18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 FAM89AQ96GI7 184 aa18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 MEIS3Q99687 375 aa18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 TRMT112Q9UI30 125 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 PARP3Q9Y6F1 533 aa18.7■□□□□ 0.58
SNRPA1-207ENST00000559309 COL11A2P13942 1736 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 ZBTB40Q9NUA8 1239 aa18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
SNRPA1-207ENST00000559309 NUTM1Q86Y26 1132 aa18.68■□□□□ 0.58
SNRPA1-207ENST00000559309 CSF1RP07333 972 aa18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 FOXO4P98177 505 aa18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 RABL6Q3YEC7 729 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 CRY2Q49AN0 593 aa18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 UBE3BQ7Z3V4 1068 aa18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
SNRPA1-207ENST00000559309 GNAI3P08754 354 aa18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 POLD1P28340 1107 aa18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 ZNF784Q8NCA9 323 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 C9orf78Q9NZ63 289 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 RTL9Q8NET4 1388 aa18.66■□□□□ 0.58
SNRPA1-207ENST00000559309 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-207ENST00000559309 MTX1Q13505 466 aa18.65■□□□□ 0.58
SNRPA1-207ENST00000559309 EPHA10Q5JZY3 1008 aa18.65■□□□□ 0.58
SNRPA1-207ENST00000559309 C3orf67Q6ZVT6 689 aa18.65■□□□□ 0.58
SNRPA1-207ENST00000559309 SUCLG2Q96I99 432 aa18.65■□□□□ 0.58
SNRPA1-207ENST00000559309 COL4A1P02462 1669 aa18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 PDE8AO60658 829 aa18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 ANKRD44Q8N8A2 993 aa18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-207ENST00000559309 FAM177BA6PVY3 158 aa18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 HCLS1P14317 486 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 ST5P78524 1137 aa18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 AAMPQ13685 434 aa18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
SNRPA1-207ENST00000559309 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms