RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
RORA-209ENST00000559145 TUBGCP6Q96RT7 1819 aa12.89□□□□□ -0.35
RORA-209ENST00000559145 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 NUP98P52948 1817 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 NPHP1O15259 732 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
RORA-209ENST00000559145 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
RORA-209ENST00000559145 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
RORA-209ENST00000559145 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
RORA-209ENST00000559145 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 TRMT112Q9UI30 125 aaKnown RBP12.88□□□□□ -0.35
RORA-209ENST00000559145 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
RORA-209ENST00000559145 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
RORA-209ENST00000559145 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
RORA-209ENST00000559145 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
RORA-209ENST00000559145 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
RORA-209ENST00000559145 GYS1P13807 737 aa12.86□□□□□ -0.35
RORA-209ENST00000559145 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
RORA-209ENST00000559145 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
RORA-209ENST00000559145 UTYO14607 1347 aa12.86□□□□□ -0.35
RORA-209ENST00000559145 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 H7C1W4 665 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 NFIXQ14938 502 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 NBPF5PQ86XG9 351 aaPredicted RBP12.85□□□□□ -0.35
RORA-209ENST00000559145 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 ZBTB38Q8NAP3 1195 aaPredicted RBP12.85□□□□□ -0.35
RORA-209ENST00000559145 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 NYXQ9GZU5 481 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
RORA-209ENST00000559145 MSL1Q68DK7 614 aa12.84□□□□□ -0.35
RORA-209ENST00000559145 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
RORA-209ENST00000559145 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
RORA-209ENST00000559145 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
RORA-209ENST00000559145 HMMRO75330 724 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 NTSR2O95665 410 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
RORA-209ENST00000559145 CEP85Q6P2H3 762 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 CHMP3Q9Y3E7 222 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 CDHR2Q9BYE9 1310 aa12.83□□□□□ -0.36
RORA-209ENST00000559145 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 CASP7P55210 303 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
RORA-209ENST00000559145 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
RORA-209ENST00000559145 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
RORA-209ENST00000559145 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
RORA-209ENST00000559145 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
RORA-209ENST00000559145 SERPINB2P05120 415 aa12.81□□□□□ -0.36
RORA-209ENST00000559145 MMP10P09238 476 aa12.81□□□□□ -0.36
RORA-209ENST00000559145 ST5P78524 1137 aa12.81□□□□□ -0.36
RORA-209ENST00000559145 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
RORA-209ENST00000559145 SYNE4Q8N205 404 aa12.81□□□□□ -0.36
RORA-209ENST00000559145 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 PDE8AO60658 829 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
RORA-209ENST00000559145 TM4SF1P30408 202 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 DDR1Q08345 913 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 KAZALD1Q96I82 304 aa12.8□□□□□ -0.36
RORA-209ENST00000559145 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
RORA-209ENST00000559145 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
RORA-209ENST00000559145 CTSWP56202 376 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 FOXO4P98177 505 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 HDAC1Q13547 482 aaPredicted RBP12.79□□□□□ -0.36
RORA-209ENST00000559145 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
RORA-209ENST00000559145 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
RORA-209ENST00000559145 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
RORA-209ENST00000559145 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 IGHDP01880 384 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 MTX1Q13505 466 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 PRR5LQ6MZQ0 368 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
RORA-209ENST00000559145 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 LAMB2P55268 1798 aa12.78□□□□□ -0.36
RORA-209ENST00000559145 ZBTB7AO95365 584 aa12.77□□□□□ -0.37
RORA-209ENST00000559145 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
RORA-209ENST00000559145 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
RORA-209ENST00000559145 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.37
RORA-209ENST00000559145 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
RORA-209ENST00000559145 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
RORA-209ENST00000559145 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
RORA-209ENST00000559145 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms