RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 MYL6BP14649 208 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
CPNE6-210ENST00000558995 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
CPNE6-210ENST00000558995 SYCE3A1L190 88 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 HS1BP3Q53T59 392 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
CPNE6-210ENST00000558995 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
CPNE6-210ENST00000558995 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
CPNE6-210ENST00000558995 TMEM51Q9NW97 253 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 LIMCH1Q9UPQ0 1083 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
CPNE6-210ENST00000558995 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
CPNE6-210ENST00000558995 CABP4P57796 275 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
CPNE6-210ENST00000558995 PDLIM2Q96JY6 352 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 AK2P54819 239 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 UTYO14607 1347 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 GRM8O00222 908 aa16.09■□□□□ 0.17
CPNE6-210ENST00000558995 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
CPNE6-210ENST00000558995 PA2G4Q9UQ80 394 aaKnown RBP16.09■□□□□ 0.17
CPNE6-210ENST00000558995 RUFY3Q7L099 469 aa16.08■□□□□ 0.16
CPNE6-210ENST00000558995 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.16
CPNE6-210ENST00000558995 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
CPNE6-210ENST00000558995 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
CPNE6-210ENST00000558995 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 C5P01031 1676 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
CPNE6-210ENST00000558995 VGLL3A8MV65 326 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 AACSQ86V21 672 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
CPNE6-210ENST00000558995 KCNB2Q92953 911 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
CPNE6-210ENST00000558995 EVA1CP58658 441 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 XAGE3Q8WTP9 111 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 SNRPA1P09661 255 aaKnown RBP16.06■□□□□ 0.16
CPNE6-210ENST00000558995 CASTP20810 708 aaKnown RBP16.06■□□□□ 0.16
CPNE6-210ENST00000558995 PTH1RQ03431 593 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 COPS6Q7L5N1 327 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 MRC1P22897 1456 aa16.06■□□□□ 0.16
CPNE6-210ENST00000558995 PHF14O94880 888 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 ZSCAN22P10073 491 aaPredicted RBP16.05■□□□□ 0.16
CPNE6-210ENST00000558995 IL2RBP14784 551 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
CPNE6-210ENST00000558995 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 FMNL2Q96PY5 1086 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 HIP1O00291 1037 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 MSNP26038 577 aaKnown RBP16.05■□□□□ 0.16
CPNE6-210ENST00000558995 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
CPNE6-210ENST00000558995 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
CPNE6-210ENST00000558995 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 SASH1O94885 1247 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 FOXD4L6Q3SYB3 417 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 FOXD4L3Q6VB84 417 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 GDPD2Q9HCC8 539 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 ZSWIM6Q9HCJ5 1215 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 ABCA3Q99758 1704 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 STX6O43752 255 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 IGKV5-2P06315 115 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 SYT1P21579 422 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 NECTIN1Q15223 517 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 SMAP1Q8IYB5 467 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
CPNE6-210ENST00000558995 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
CPNE6-210ENST00000558995 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
CPNE6-210ENST00000558995 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
CPNE6-210ENST00000558995 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
CPNE6-210ENST00000558995 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
CPNE6-210ENST00000558995 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
CPNE6-210ENST00000558995 CPA1P15085 419 aa16.03■□□□□ 0.16
CPNE6-210ENST00000558995 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
CPNE6-210ENST00000558995 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
CPNE6-210ENST00000558995 TPM2P07951 284 aa16.02■□□□□ 0.16
CPNE6-210ENST00000558995 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.16
CPNE6-210ENST00000558995 BTG4Q9NY30 223 aa16.02■□□□□ 0.16
CPNE6-210ENST00000558995 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.15
CPNE6-210ENST00000558995 SNRKQ9NRH2 765 aa16.02■□□□□ 0.15
CPNE6-210ENST00000558995 F13A1P00488 732 aa16.01■□□□□ 0.15
CPNE6-210ENST00000558995 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
CPNE6-210ENST00000558995 MYD88Q99836 296 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms