RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
TRPM1-208ENST00000558768 NDUFAB1O14561 156 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 FKBP5Q13451 457 aaPredicted RBP11.1□□□□□ -0.63
TRPM1-208ENST00000558768 KLHL10Q6JEL2 608 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 HDXQ7Z353 690 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 AMOTL1Q8IY63 956 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
TRPM1-208ENST00000558768 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 SEPT11Q9NVA2 429 aaKnown RBP11.1□□□□□ -0.63
TRPM1-208ENST00000558768 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
TRPM1-208ENST00000558768 ATP11AP98196 1134 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 ALS2CR12Q96Q35 445 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 NUCKS1Q9H1E3 243 aaKnown RBP11.1□□□□□ -0.63
TRPM1-208ENST00000558768 MAGI3Q5TCQ9 1506 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 SAMD9Q5K651 1589 aa11.1□□□□□ -0.63
TRPM1-208ENST00000558768 ZEB2O60315 1214 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 YEATS4O95619 227 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 PIP4K2BP78356 416 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 PFDN1O60925 122 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 PEX19P40855 299 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 SART3Q15020 963 aaKnown RBP11.09□□□□□ -0.63
TRPM1-208ENST00000558768 CAMK4Q16566 473 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 TMC6Q7Z403 805 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 STMN4Q9H169 189 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-208ENST00000558768 RABGAP1Q9Y3P9 1069 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 PHACTR2O75167 634 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRPM1-208ENST00000558768 HOOK3Q86VS8 718 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 CDK5RAP3Q96JB5 506 aa11.09□□□□□ -0.63
TRPM1-208ENST00000558768 CCDC110Q8TBZ0 833 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
TRPM1-208ENST00000558768 SAMD15Q9P1V8 674 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 C17orf53Q8N3J3 647 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-208ENST00000558768 DDX12PQ92771 950 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 TBC1D31Q96DN5 1066 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 AIMP1Q12904 312 aaKnown RBP11.08□□□□□ -0.64
TRPM1-208ENST00000558768 LRRC23Q53EV4 343 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-208ENST00000558768 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 FAM200AQ8TCP9 573 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 DDX27Q96GQ7 796 aaKnown RBP11.08□□□□□ -0.64
TRPM1-208ENST00000558768 GGNBP2Q9H3C7 697 aa11.08□□□□□ -0.64
TRPM1-208ENST00000558768 CD2BP2O95400 341 aaKnown RBP11.07□□□□□ -0.64
TRPM1-208ENST00000558768 ANAPC15P60006 121 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 CEP85LQ5SZL2 805 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 RAB3IL1Q8TBN0 382 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 STMN2Q93045 179 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-208ENST00000558768 SDSP20132 328 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 DDIT3P35638 169 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 SETDB1Q15047 1291 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 GIMAP6Q6P9H5 292 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 MXRA7P84157 204 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 ZKSCAN8Q15776 578 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-208ENST00000558768 STX1AQ16623 288 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
TRPM1-208ENST00000558768 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-208ENST00000558768 SLC8A1P32418 973 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 BLOC1S2Q6QNY1 142 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 FCHSD2O94868 740 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 ZBTB16Q05516 673 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 TRIM7Q9C029 511 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-208ENST00000558768 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 CETN3O15182 167 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 GNAI3P08754 354 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 CCDC129Q6ZRS4 1044 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 GBP5Q96PP8 586 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 STK26Q9P289 416 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 STX6O43752 255 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 BRD1O95696 1058 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 GBP1P32455 592 aa11.06□□□□□ -0.64
TRPM1-208ENST00000558768 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-208ENST00000558768 NCOA3Q9Y6Q9 1424 aa11.05□□□□□ -0.64
TRPM1-208ENST00000558768 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
TRPM1-208ENST00000558768 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-208ENST00000558768 HOMER2Q9NSB8 354 aa11.05□□□□□ -0.64
TRPM1-208ENST00000558768 ITSN2Q9NZM3 1697 aa11.05□□□□□ -0.64
TRPM1-208ENST00000558768 ZSCAN22P10073 491 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-208ENST00000558768 FKBP15Q5T1M5 1219 aa11.05□□□□□ -0.64
TRPM1-208ENST00000558768 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms