RNA–Protein interactions for RNA: ENST00000558547.1

PIF1-204, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-204ENST00000558547 NIP7Q9Y221 180 aaKnown RBP eCLIP9.7□□□□□ -0.86
PIF1-204ENST00000558547 HLFQ16534 295 aa9.69□□□□□ -0.86
PIF1-204ENST00000558547 TPTE2Q6XPS3 522 aa9.69□□□□□ -0.86
PIF1-204ENST00000558547 ABCC12Q96J65 1359 aa9.69□□□□□ -0.86
PIF1-204ENST00000558547 HHIPL1Q96JK4 782 aa9.69□□□□□ -0.86
PIF1-204ENST00000558547 ADARB2Q9NS39 739 aaKnown RBP9.69□□□□□ -0.86
PIF1-204ENST00000558547 GPRC5DQ9NZD1 345 aa9.69□□□□□ -0.86
PIF1-204ENST00000558547 MKI67P46013 3256 aaKnown RBP9.69□□□□□ -0.86
PIF1-204ENST00000558547 HIRAP54198 1017 aaPredicted RBP9.68□□□□□ -0.86
PIF1-204ENST00000558547 CLEC4GQ6UXB4 293 aa9.68□□□□□ -0.86
PIF1-204ENST00000558547 NUTM1Q86Y26 1132 aa9.68□□□□□ -0.86
PIF1-204ENST00000558547 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
PIF1-204ENST00000558547 NUP98P52948 1817 aa9.68□□□□□ -0.86
PIF1-204ENST00000558547 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 GMPSP49915 693 aaPredicted RBP9.67□□□□□ -0.86
PIF1-204ENST00000558547 HUNKP57058 714 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 NOGQ13253 232 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 AOC3Q16853 763 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 NBPF10Q6P3W6 841 aaKnown RBP9.67□□□□□ -0.86
PIF1-204ENST00000558547 NBPF15Q8N660 670 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 PGAP2Q9UHJ9 254 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
PIF1-204ENST00000558547 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
PIF1-204ENST00000558547 TRPA1O75762 1119 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
PIF1-204ENST00000558547 CXCL9Q07325 125 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 NIM1KQ8IY84 436 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
PIF1-204ENST00000558547 POLR2AP24928 1970 aaKnown RBP9.66□□□□□ -0.86
PIF1-204ENST00000558547 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
PIF1-204ENST00000558547 PPIP5K2O43314 1243 aa9.65□□□□□ -0.86
PIF1-204ENST00000558547 KIF23Q02241 960 aaPredicted RBP9.65□□□□□ -0.86
PIF1-204ENST00000558547 C3orf67Q6ZVT6 689 aa9.65□□□□□ -0.86
PIF1-204ENST00000558547 USP48Q86UV5 1035 aa9.65□□□□□ -0.86
PIF1-204ENST00000558547 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.86
PIF1-204ENST00000558547 RNF186Q9NXI6 227 aa9.65□□□□□ -0.86
PIF1-204ENST00000558547 HTTP42858 3142 aa9.65□□□□□ -0.87
PIF1-204ENST00000558547 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
PIF1-204ENST00000558547 CENPFP49454 3210 aa9.64□□□□□ -0.87
PIF1-204ENST00000558547 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
PIF1-204ENST00000558547 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
PIF1-204ENST00000558547 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
PIF1-204ENST00000558547 CDC37L1Q7L3B6 337 aa9.64□□□□□ -0.87
PIF1-204ENST00000558547 RAD17O75943 681 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 HOXA10P31260 410 aaPredicted RBP9.63□□□□□ -0.87
PIF1-204ENST00000558547 RGMBQ6NW40 437 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 CTU1Q7Z7A3 348 aaKnown RBP9.63□□□□□ -0.87
PIF1-204ENST00000558547 NGEFQ8N5V2 710 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 SAGE1Q9NXZ1 904 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 ZNRF3Q9ULT6 936 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 RIC1Q4ADV7 1423 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 LAMB2P55268 1798 aa9.63□□□□□ -0.87
PIF1-204ENST00000558547 TAF1P21675 1872 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
PIF1-204ENST00000558547 EGFRP00533 1210 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 SNRPA1P09661 255 aaKnown RBP9.62□□□□□ -0.87
PIF1-204ENST00000558547 GPTP24298 496 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
PIF1-204ENST00000558547 PHACTR3Q96KR7 559 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 CSRNP1Q96S65 589 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 BCL2L13Q9BXK5 485 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 CNOT7Q9UIV1 285 aaKnown RBP9.62□□□□□ -0.87
PIF1-204ENST00000558547 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
PIF1-204ENST00000558547 UBN2Q6ZU65 1347 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 ADM5C9JUS6 153 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
PIF1-204ENST00000558547 ZNF157P51786 506 aaPredicted RBP9.61□□□□□ -0.87
PIF1-204ENST00000558547 HABP4Q5JVS0 413 aaKnown RBP9.61□□□□□ -0.87
PIF1-204ENST00000558547 SUSD4Q5VX71 490 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
PIF1-204ENST00000558547 RBM17Q96I25 401 aaKnown RBP9.61□□□□□ -0.87
PIF1-204ENST00000558547 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 NYXQ9GZU5 481 aa9.61□□□□□ -0.87
PIF1-204ENST00000558547 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 BRCA2P51587 3418 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 SZT2Q5T011 3432 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 YDJCA8MPS7 323 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 RGL2O15211 777 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
PIF1-204ENST00000558547 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 TTLL7Q6ZT98 887 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 MCM10Q7L590 875 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 MICALL2Q8IY33 904 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
PIF1-204ENST00000558547 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
PIF1-204ENST00000558547 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
PIF1-204ENST00000558547 DUOX1Q9NRD9 1551 aa9.59□□□□□ -0.87
PIF1-204ENST00000558547 SLC10A3P09131 477 aa9.59□□□□□ -0.87
PIF1-204ENST00000558547 DCTN1Q14203 1278 aa9.59□□□□□ -0.87
PIF1-204ENST00000558547 TBC1D10BQ4KMP7 808 aaPredicted RBP9.59□□□□□ -0.87
PIF1-204ENST00000558547 KRT26Q7Z3Y9 468 aa9.59□□□□□ -0.87
PIF1-204ENST00000558547 CCDC102AQ96A19 550 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms