RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 USPL1Q5W0Q7 1092 aa18.63■□□□□ 0.57
VPS18-202ENST00000558474 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
VPS18-202ENST00000558474 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
VPS18-202ENST00000558474 ZBTB38Q8NAP3 1195 aaPredicted RBP18.63■□□□□ 0.57
VPS18-202ENST00000558474 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
VPS18-202ENST00000558474 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
VPS18-202ENST00000558474 CASP7P55210 303 aa18.62■□□□□ 0.57
VPS18-202ENST00000558474 SLC15A2Q16348 729 aa18.62■□□□□ 0.57
VPS18-202ENST00000558474 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
VPS18-202ENST00000558474 BCL2L12Q9HB09 334 aa18.62■□□□□ 0.57
VPS18-202ENST00000558474 CDHR2Q9BYE9 1310 aa18.62■□□□□ 0.57
VPS18-202ENST00000558474 HMMRO75330 724 aa18.61■□□□□ 0.57
VPS18-202ENST00000558474 PHF14O94880 888 aa18.61■□□□□ 0.57
VPS18-202ENST00000558474 MTX1Q13505 466 aa18.61■□□□□ 0.57
VPS18-202ENST00000558474 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
VPS18-202ENST00000558474 DEFB132Q7Z7B7 95 aa18.61■□□□□ 0.57
VPS18-202ENST00000558474 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
VPS18-202ENST00000558474 LRRFIP2Q9Y608 721 aaKnown RBP18.61■□□□□ 0.57
VPS18-202ENST00000558474 UBN2Q6ZU65 1347 aa18.6■□□□□ 0.57
VPS18-202ENST00000558474 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
VPS18-202ENST00000558474 B4GALNT3Q6L9W6 998 aa18.6■□□□□ 0.57
VPS18-202ENST00000558474 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
VPS18-202ENST00000558474 UPF1Q92900 1129 aaKnown RBP eCLIP18.6■□□□□ 0.57
VPS18-202ENST00000558474 PLA2G12BQ9BX93 195 aa18.6■□□□□ 0.57
VPS18-202ENST00000558474 LAMB2P55268 1798 aa18.6■□□□□ 0.57
VPS18-202ENST00000558474 GPTP24298 496 aa18.59■□□□□ 0.57
VPS18-202ENST00000558474 UBE3BQ7Z3V4 1068 aa18.59■□□□□ 0.57
VPS18-202ENST00000558474 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
VPS18-202ENST00000558474 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
VPS18-202ENST00000558474 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
VPS18-202ENST00000558474 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
VPS18-202ENST00000558474 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
VPS18-202ENST00000558474 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.57
VPS18-202ENST00000558474 KDM2BQ8NHM5 1336 aa18.58■□□□□ 0.57
VPS18-202ENST00000558474 GYS1P13807 737 aa18.58■□□□□ 0.56
VPS18-202ENST00000558474 RABL6Q3YEC7 729 aaPredicted RBP18.58■□□□□ 0.56
VPS18-202ENST00000558474 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
VPS18-202ENST00000558474 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
VPS18-202ENST00000558474 MYH3P11055 1940 aa18.58■□□□□ 0.56
VPS18-202ENST00000558474 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
VPS18-202ENST00000558474 SH3TC1Q8TE82 1336 aa18.57■□□□□ 0.56
VPS18-202ENST00000558474 TBC1D9BQ66K14 1250 aa18.57■□□□□ 0.56
VPS18-202ENST00000558474 COL23A1Q86Y22 540 aaPredicted RBP18.57■□□□□ 0.56
VPS18-202ENST00000558474 SIRT2Q8IXJ6 389 aa18.57■□□□□ 0.56
VPS18-202ENST00000558474 NLGN1Q8N2Q7 840 aa18.57■□□□□ 0.56
VPS18-202ENST00000558474 NTSR2O95665 410 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 GCC1Q96CN9 775 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
VPS18-202ENST00000558474 IGHDP01880 384 aa18.55■□□□□ 0.56
VPS18-202ENST00000558474 POLA2Q14181 598 aa18.55■□□□□ 0.56
VPS18-202ENST00000558474 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
VPS18-202ENST00000558474 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
VPS18-202ENST00000558474 TM4SF1P30408 202 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 FOXO4P98177 505 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 FAM89AQ96GI7 184 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 RIC1Q4ADV7 1423 aa18.54■□□□□ 0.56
VPS18-202ENST00000558474 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
VPS18-202ENST00000558474 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
VPS18-202ENST00000558474 PDE8AO60658 829 aa18.53■□□□□ 0.56
VPS18-202ENST00000558474 NFIXQ14938 502 aa18.53■□□□□ 0.56
VPS18-202ENST00000558474 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
VPS18-202ENST00000558474 SLC16A10Q8TF71 515 aa18.53■□□□□ 0.56
VPS18-202ENST00000558474 DCTPP1Q9H773 170 aa18.53■□□□□ 0.56
VPS18-202ENST00000558474 SRGAP3O43295 1099 aa18.52■□□□□ 0.56
VPS18-202ENST00000558474 CSF1RP07333 972 aa18.52■□□□□ 0.56
VPS18-202ENST00000558474 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
VPS18-202ENST00000558474 NRXN2Q9P2S2 1712 aa18.52■□□□□ 0.55
VPS18-202ENST00000558474 PNMA6EA0A0J9YXQ4 647 aa18.51■□□□□ 0.55
VPS18-202ENST00000558474 MSH5O43196 834 aa18.51■□□□□ 0.55
VPS18-202ENST00000558474 HSP90AB4PQ58FF6 505 aa18.51■□□□□ 0.55
VPS18-202ENST00000558474 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
VPS18-202ENST00000558474 LMBR1LQ6UX01 489 aa18.5■□□□□ 0.55
VPS18-202ENST00000558474 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
VPS18-202ENST00000558474 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
VPS18-202ENST00000558474 CTSWP56202 376 aa18.49■□□□□ 0.55
VPS18-202ENST00000558474 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
VPS18-202ENST00000558474 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
VPS18-202ENST00000558474 NOP58Q9Y2X3 529 aaKnown RBP18.49■□□□□ 0.55
VPS18-202ENST00000558474 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
VPS18-202ENST00000558474 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
VPS18-202ENST00000558474 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
VPS18-202ENST00000558474 COPRSQ9NQ92 184 aa18.48■□□□□ 0.55
VPS18-202ENST00000558474 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
VPS18-202ENST00000558474 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
VPS18-202ENST00000558474 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
VPS18-202ENST00000558474 SERPINB2P05120 415 aa18.47■□□□□ 0.55
VPS18-202ENST00000558474 SF3B3Q15393 1217 aaKnown RBP18.47■□□□□ 0.55
VPS18-202ENST00000558474 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
VPS18-202ENST00000558474 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
VPS18-202ENST00000558474 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 RFX5P48382 616 aaPredicted RBP18.46■□□□□ 0.55
VPS18-202ENST00000558474 ST5P78524 1137 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 CCDC57Q2TAC2 916 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms