RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 NIP7Q9Y221 180 aaKnown RBP eCLIP23.83■■□□□ 1.41
LHX4-202ENST00000558139 HUNKP57058 714 aa23.82■■□□□ 1.4
LHX4-202ENST00000558139 CTU1Q7Z7A3 348 aaKnown RBP23.82■■□□□ 1.4
LHX4-202ENST00000558139 ZC3H15Q8WU90 426 aaKnown RBP23.82■■□□□ 1.4
LHX4-202ENST00000558139 FAM177BA6PVY3 158 aa23.81■■□□□ 1.4
LHX4-202ENST00000558139 HMOX1P09601 288 aa23.81■■□□□ 1.4
LHX4-202ENST00000558139 SNED1Q8TER0 1413 aa23.81■■□□□ 1.4
LHX4-202ENST00000558139 UBR2Q8IWV8 1755 aa23.8■■□□□ 1.4
LHX4-202ENST00000558139 TRPA1O75762 1119 aa23.79■■□□□ 1.4
LHX4-202ENST00000558139 RNF186Q9NXI6 227 aa23.79■■□□□ 1.4
LHX4-202ENST00000558139 COL4A5P29400 1685 aa23.79■■□□□ 1.4
LHX4-202ENST00000558139 RGMBQ6NW40 437 aa23.78■■□□□ 1.4
LHX4-202ENST00000558139 CCDC102AQ96A19 550 aa23.78■■□□□ 1.4
LHX4-202ENST00000558139 RGL2O15211 777 aa23.77■■□□□ 1.4
LHX4-202ENST00000558139 KIF23Q02241 960 aaPredicted RBP23.77■■□□□ 1.4
LHX4-202ENST00000558139 CRY2Q49AN0 593 aa23.77■■□□□ 1.4
LHX4-202ENST00000558139 HABP4Q5JVS0 413 aaKnown RBP23.77■■□□□ 1.4
LHX4-202ENST00000558139 HPS5Q9UPZ3 1129 aa23.77■■□□□ 1.4
LHX4-202ENST00000558139 PPIP5K2O43314 1243 aa23.76■■□□□ 1.39
LHX4-202ENST00000558139 RPGRQ92834 1020 aaKnown RBP23.76■■□□□ 1.39
LHX4-202ENST00000558139 PANK3Q9H999 370 aa23.76■■□□□ 1.39
LHX4-202ENST00000558139 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
LHX4-202ENST00000558139 FAM155AB1AL88 458 aaPredicted RBP23.75■■□□□ 1.39
LHX4-202ENST00000558139 PIP4K2AP48426 406 aaPredicted RBP23.75■■□□□ 1.39
LHX4-202ENST00000558139 GMPSP49915 693 aaPredicted RBP23.75■■□□□ 1.39
LHX4-202ENST00000558139 VPS33BQ9H267 617 aa23.75■■□□□ 1.39
LHX4-202ENST00000558139 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
LHX4-202ENST00000558139 CXCL9Q07325 125 aa23.74■■□□□ 1.39
LHX4-202ENST00000558139 PKN2Q16513 984 aaKnown RBP23.74■■□□□ 1.39
LHX4-202ENST00000558139 IL17REQ8NFR9 667 aa23.74■■□□□ 1.39
LHX4-202ENST00000558139 ZNRF3Q9ULT6 936 aa23.74■■□□□ 1.39
LHX4-202ENST00000558139 USP16Q9Y5T5 823 aa23.74■■□□□ 1.39
LHX4-202ENST00000558139 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
LHX4-202ENST00000558139 HIRAP54198 1017 aaPredicted RBP23.73■■□□□ 1.39
LHX4-202ENST00000558139 USP48Q86UV5 1035 aa23.73■■□□□ 1.39
LHX4-202ENST00000558139 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
LHX4-202ENST00000558139 TMX4Q9H1E5 349 aaPredicted RBP23.73■■□□□ 1.39
LHX4-202ENST00000558139 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
LHX4-202ENST00000558139 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
LHX4-202ENST00000558139 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
LHX4-202ENST00000558139 ZNF157P51786 506 aaPredicted RBP23.71■■□□□ 1.39
LHX4-202ENST00000558139 AOC3Q16853 763 aa23.71■■□□□ 1.39
LHX4-202ENST00000558139 C2orf69Q8N8R5 385 aa23.71■■□□□ 1.39
LHX4-202ENST00000558139 TCERG1O14776 1098 aaKnown RBP23.7■■□□□ 1.38
LHX4-202ENST00000558139 PPEF1O14829 653 aaPredicted RBP23.7■■□□□ 1.38
LHX4-202ENST00000558139 GBA2Q9HCG7 927 aaPredicted RBP23.7■■□□□ 1.38
LHX4-202ENST00000558139 BTBD11A6QL63 1104 aa23.69■■□□□ 1.38
LHX4-202ENST00000558139 RBM17Q96I25 401 aaKnown RBP23.69■■□□□ 1.38
LHX4-202ENST00000558139 KIF7Q2M1P5 1343 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 H7C1D1 291 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 KCNQ3O43525 872 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 TNIP1Q15025 636 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 REM2Q8IYK8 340 aaPredicted RBP23.68■■□□□ 1.38
LHX4-202ENST00000558139 SUPT20HQ8NEM7 779 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 TRPM4Q8TD43 1214 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 CRAMP1Q96RY5 1269 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 CSRNP1Q96S65 589 aa23.68■■□□□ 1.38
LHX4-202ENST00000558139 NUTM1Q86Y26 1132 aa23.67■■□□□ 1.38
LHX4-202ENST00000558139 GAS2L2Q8NHY3 880 aa23.67■■□□□ 1.38
LHX4-202ENST00000558139 HDAC9Q9UKV0 1011 aa23.67■■□□□ 1.38
LHX4-202ENST00000558139 SNRPA1P09661 255 aaKnown RBP23.66■■□□□ 1.38
LHX4-202ENST00000558139 HLFQ16534 295 aa23.66■■□□□ 1.38
LHX4-202ENST00000558139 CNOT7Q9UIV1 285 aaKnown RBP23.66■■□□□ 1.38
LHX4-202ENST00000558139 ABCC12Q96J65 1359 aa23.65■■□□□ 1.38
LHX4-202ENST00000558139 DLK2Q6UY11 383 aa23.64■■□□□ 1.37
LHX4-202ENST00000558139 KRT26Q7Z3Y9 468 aa23.64■■□□□ 1.37
LHX4-202ENST00000558139 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
LHX4-202ENST00000558139 DIAPH1O60610 1272 aaKnown RBP23.63■■□□□ 1.37
LHX4-202ENST00000558139 RAD17O75943 681 aa23.63■■□□□ 1.37
LHX4-202ENST00000558139 SLC10A3P09131 477 aa23.63■■□□□ 1.37
LHX4-202ENST00000558139 NBPF26B4DH59 902 aa23.62■■□□□ 1.37
LHX4-202ENST00000558139 NBPF10Q6P3W6 841 aaKnown RBP23.62■■□□□ 1.37
LHX4-202ENST00000558139 SLC51AQ86UW1 340 aa23.62■■□□□ 1.37
LHX4-202ENST00000558139 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
LHX4-202ENST00000558139 ATP6V0A2Q9Y487 856 aa23.62■■□□□ 1.37
LHX4-202ENST00000558139 RTFDC1Q9BY42 306 aaPredicted RBP23.61■■□□□ 1.37
LHX4-202ENST00000558139 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
LHX4-202ENST00000558139 RIC1Q4ADV7 1423 aa23.59■■□□□ 1.37
LHX4-202ENST00000558139 FXR1P51114 621 aaKnown RBP eCLIP23.59■■□□□ 1.37
LHX4-202ENST00000558139 DCPSQ96C86 337 aaKnown RBP23.59■■□□□ 1.37
LHX4-202ENST00000558139 CEMIPQ8WUJ3 1361 aa23.58■■□□□ 1.37
LHX4-202ENST00000558139 SHTN1A0MZ66 631 aa23.58■■□□□ 1.37
LHX4-202ENST00000558139 KIAA2012Q0VF49 1180 aa23.58■■□□□ 1.37
LHX4-202ENST00000558139 FBXO46Q6PJ61 603 aaPredicted RBP23.58■■□□□ 1.37
LHX4-202ENST00000558139 DPP8Q6V1X1 898 aaPredicted RBP23.58■■□□□ 1.37
LHX4-202ENST00000558139 ZNF296Q8WUU4 475 aaPredicted RBP23.58■■□□□ 1.37
LHX4-202ENST00000558139 ERVV-1B6SEH8 477 aa23.57■■□□□ 1.36
LHX4-202ENST00000558139 SAMD7Q7Z3H4 446 aa23.57■■□□□ 1.36
LHX4-202ENST00000558139 DPF2Q92785 391 aa23.56■■□□□ 1.36
LHX4-202ENST00000558139 ADM5C9JUS6 153 aa23.55■■□□□ 1.36
LHX4-202ENST00000558139 MPNDQ8N594 471 aa23.55■■□□□ 1.36
LHX4-202ENST00000558139 NLRP3Q96P20 1036 aa23.55■■□□□ 1.36
LHX4-202ENST00000558139 IBTKQ9P2D0 1353 aaPredicted RBP23.53■■□□□ 1.36
LHX4-202ENST00000558139 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
LHX4-202ENST00000558139 TBC1D8O95759 1140 aa23.53■■□□□ 1.36
LHX4-202ENST00000558139 TBC1D10BQ4KMP7 808 aaPredicted RBP23.53■■□□□ 1.36
LHX4-202ENST00000558139 SUSD4Q5VX71 490 aa23.53■■□□□ 1.36
LHX4-202ENST00000558139 NGEFQ8N5V2 710 aa23.53■■□□□ 1.36
LHX4-202ENST00000558139 ZBTB12Q9Y330 459 aaPredicted RBP23.53■■□□□ 1.36
LHX4-202ENST00000558139 BBOX1O75936 387 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms