RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 UBTFL1P0CB47 393 aaPredicted RBP15.57■□□□□ 0.08
TPM1-209ENST00000558072 GYS1P13807 737 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
TPM1-209ENST00000558072 GNAI2P04899 355 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 CWF19L2Q2TBE0 894 aaKnown RBP15.56■□□□□ 0.08
TPM1-209ENST00000558072 PPP1R42Q7Z4L9 355 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 CCDC24Q8N4L8 307 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
TPM1-209ENST00000558072 ISCA1Q9BUE6 129 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
TPM1-209ENST00000558072 GRM8O00222 908 aa15.55■□□□□ 0.08
TPM1-209ENST00000558072 GCKRQ14397 625 aa15.55■□□□□ 0.08
TPM1-209ENST00000558072 UTYO14607 1347 aa15.54■□□□□ 0.08
TPM1-209ENST00000558072 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
TPM1-209ENST00000558072 DDR1Q08345 913 aa15.54■□□□□ 0.08
TPM1-209ENST00000558072 RPAP2Q8IXW5 612 aaPredicted RBP15.54■□□□□ 0.08
TPM1-209ENST00000558072 NYXQ9GZU5 481 aa15.54■□□□□ 0.08
TPM1-209ENST00000558072 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
TPM1-209ENST00000558072 TNRC6CQ9HCJ0 1690 aaKnown RBP15.54■□□□□ 0.08
TPM1-209ENST00000558072 HMMRO75330 724 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 NFIXQ14938 502 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
TPM1-209ENST00000558072 ZNF34Q8IZ26 560 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 NLGN1Q8N2Q7 840 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 SETDB2Q96T68 719 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 USP44Q9H0E7 712 aa15.53■□□□□ 0.08
TPM1-209ENST00000558072 CARMIL3Q8ND23 1372 aa15.52■□□□□ 0.08
TPM1-209ENST00000558072 PCCAP05165 728 aaPredicted RBP15.52■□□□□ 0.08
TPM1-209ENST00000558072 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
TPM1-209ENST00000558072 ZBTB38Q8NAP3 1195 aaPredicted RBP15.52■□□□□ 0.08
TPM1-209ENST00000558072 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.08
TPM1-209ENST00000558072 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
TPM1-209ENST00000558072 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
TPM1-209ENST00000558072 H7C1W4 665 aa15.51■□□□□ 0.07
TPM1-209ENST00000558072 NLRP10Q86W26 655 aa15.51■□□□□ 0.07
TPM1-209ENST00000558072 SLC16A10Q8TF71 515 aa15.51■□□□□ 0.07
TPM1-209ENST00000558072 UTP14AQ9BVJ6 771 aaKnown RBP15.51■□□□□ 0.07
TPM1-209ENST00000558072 ABCC12Q96J65 1359 aa15.5■□□□□ 0.07
TPM1-209ENST00000558072 MMP10P09238 476 aa15.5■□□□□ 0.07
TPM1-209ENST00000558072 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
TPM1-209ENST00000558072 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
TPM1-209ENST00000558072 MEIS3Q99687 375 aa15.5■□□□□ 0.07
TPM1-209ENST00000558072 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
TPM1-209ENST00000558072 DDX60Q8IY21 1712 aaKnown RBP15.5■□□□□ 0.07
TPM1-209ENST00000558072 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 CDHR2Q9BYE9 1310 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 NRXN2Q9P2S2 1712 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
TPM1-209ENST00000558072 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 LAMB2P55268 1798 aa15.49■□□□□ 0.07
TPM1-209ENST00000558072 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
TPM1-209ENST00000558072 HDAC1Q13547 482 aaPredicted RBP15.48■□□□□ 0.07
TPM1-209ENST00000558072 PLA2G12BQ9BX93 195 aa15.48■□□□□ 0.07
TPM1-209ENST00000558072 COL4A1P02462 1669 aa15.48■□□□□ 0.07
TPM1-209ENST00000558072 NPHP1O15259 732 aa15.47■□□□□ 0.07
TPM1-209ENST00000558072 NTSR2O95665 410 aa15.47■□□□□ 0.07
TPM1-209ENST00000558072 COL11A2P13942 1736 aaPredicted RBP15.47■□□□□ 0.07
TPM1-209ENST00000558072 TM4SF1P30408 202 aa15.47■□□□□ 0.07
TPM1-209ENST00000558072 UBE3BQ7Z3V4 1068 aa15.47■□□□□ 0.07
TPM1-209ENST00000558072 ANKRD44Q8N8A2 993 aa15.47■□□□□ 0.07
TPM1-209ENST00000558072 NBPF7P0C2Y1 421 aaPredicted RBP15.46■□□□□ 0.07
TPM1-209ENST00000558072 ATP8B2P98198 1209 aa15.46■□□□□ 0.07
TPM1-209ENST00000558072 MTX1Q13505 466 aa15.46■□□□□ 0.07
TPM1-209ENST00000558072 HSP90AB4PQ58FF6 505 aa15.46■□□□□ 0.07
TPM1-209ENST00000558072 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
TPM1-209ENST00000558072 CENPQQ7L2Z9 268 aaPredicted RBP15.46■□□□□ 0.07
TPM1-209ENST00000558072 NBPF5PQ86XG9 351 aaPredicted RBP15.46■□□□□ 0.07
TPM1-209ENST00000558072 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
TPM1-209ENST00000558072 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
TPM1-209ENST00000558072 PDE8AO60658 829 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 SERPINB2P05120 415 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 ERFEQ4G0M1 354 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 GCC1Q96CN9 775 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 FAM89AQ96GI7 184 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 MTFR1LQ9H019 292 aa15.45■□□□□ 0.06
TPM1-209ENST00000558072 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
TPM1-209ENST00000558072 IRS4O14654 1257 aaPredicted RBP15.44■□□□□ 0.06
TPM1-209ENST00000558072 PTGER2P43116 358 aa15.44■□□□□ 0.06
TPM1-209ENST00000558072 CASP7P55210 303 aa15.44■□□□□ 0.06
TPM1-209ENST00000558072 ST5P78524 1137 aa15.44■□□□□ 0.06
TPM1-209ENST00000558072 PRR5LQ6MZQ0 368 aa15.44■□□□□ 0.06
TPM1-209ENST00000558072 CEP85Q6P2H3 762 aa15.44■□□□□ 0.06
TPM1-209ENST00000558072 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
TPM1-209ENST00000558072 RABL6Q3YEC7 729 aaPredicted RBP15.43■□□□□ 0.06
TPM1-209ENST00000558072 SLC10A5Q5PT55 438 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 KLHL34Q8N239 644 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 SUCLG2Q96I99 432 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 SGIP1Q9BQI5 828 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 PARP3Q9Y6F1 533 aa15.43■□□□□ 0.06
TPM1-209ENST00000558072 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms