RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DEFB132Q7Z7B7 95 aa21.11■□□□□ 0.97
SNX1-203ENST00000558040 NLRP10Q86W26 655 aa21.11■□□□□ 0.97
SNX1-203ENST00000558040 STK32BQ9NY57 414 aa21.11■□□□□ 0.97
SNX1-203ENST00000558040 LRRFIP2Q9Y608 721 aaKnown RBP21.11■□□□□ 0.97
SNX1-203ENST00000558040 HDAC1Q13547 482 aaPredicted RBP21.1■□□□□ 0.97
SNX1-203ENST00000558040 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
SNX1-203ENST00000558040 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
SNX1-203ENST00000558040 NIP7Q9Y221 180 aaKnown RBP eCLIP21.1■□□□□ 0.97
SNX1-203ENST00000558040 H7C1W4 665 aa21.09■□□□□ 0.97
SNX1-203ENST00000558040 PCCAP05165 728 aaPredicted RBP21.09■□□□□ 0.97
SNX1-203ENST00000558040 CEP85Q6P2H3 762 aa21.09■□□□□ 0.97
SNX1-203ENST00000558040 ANKRD44Q8N8A2 993 aa21.09■□□□□ 0.97
SNX1-203ENST00000558040 ZBTB38Q8NAP3 1195 aaPredicted RBP21.09■□□□□ 0.97
SNX1-203ENST00000558040 HMMRO75330 724 aa21.08■□□□□ 0.97
SNX1-203ENST00000558040 CENPQQ7L2Z9 268 aaPredicted RBP21.08■□□□□ 0.97
SNX1-203ENST00000558040 PPP1R42Q7Z4L9 355 aa21.08■□□□□ 0.97
SNX1-203ENST00000558040 UBN2Q6ZU65 1347 aa21.07■□□□□ 0.96
SNX1-203ENST00000558040 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
SNX1-203ENST00000558040 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
SNX1-203ENST00000558040 CASP7P55210 303 aa21.06■□□□□ 0.96
SNX1-203ENST00000558040 SLC15A2Q16348 729 aa21.06■□□□□ 0.96
SNX1-203ENST00000558040 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
SNX1-203ENST00000558040 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
SNX1-203ENST00000558040 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
SNX1-203ENST00000558040 CDHR2Q9BYE9 1310 aa21.05■□□□□ 0.96
SNX1-203ENST00000558040 ATP8B2P98198 1209 aa21.05■□□□□ 0.96
SNX1-203ENST00000558040 TBC1D9BQ66K14 1250 aa21.05■□□□□ 0.96
SNX1-203ENST00000558040 SETDB2Q96T68 719 aa21.05■□□□□ 0.96
SNX1-203ENST00000558040 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 QSER1Q2KHR3 1735 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 MSH5O43196 834 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 IGHDP01880 384 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 HSP90B1P14625 803 aaKnown RBP21.04■□□□□ 0.96
SNX1-203ENST00000558040 MTX1Q13505 466 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 SUSD4Q5VX71 490 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 UPF1Q92900 1129 aaKnown RBP eCLIP21.04■□□□□ 0.962e-7■■■■■ 31.4
SNX1-203ENST00000558040 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
SNX1-203ENST00000558040 ANO8Q9HCE9 1232 aaPredicted RBP21.04■□□□□ 0.96
SNX1-203ENST00000558040 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
SNX1-203ENST00000558040 GYS1P13807 737 aa21.03■□□□□ 0.96
SNX1-203ENST00000558040 RTL5Q5HYW3 569 aaPredicted RBP21.03■□□□□ 0.96
SNX1-203ENST00000558040 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SNX1-203ENST00000558040 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
SNX1-203ENST00000558040 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
SNX1-203ENST00000558040 JARID2Q92833 1246 aaPredicted RBP21.03■□□□□ 0.96
SNX1-203ENST00000558040 FAM89AQ96GI7 184 aa21.03■□□□□ 0.96
SNX1-203ENST00000558040 NYXQ9GZU5 481 aa21.03■□□□□ 0.96
SNX1-203ENST00000558040 CARMIL3Q8ND23 1372 aa21.02■□□□□ 0.96
SNX1-203ENST00000558040 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
SNX1-203ENST00000558040 KAZALD1Q96I82 304 aa21.02■□□□□ 0.96
SNX1-203ENST00000558040 PLA2G12BQ9BX93 195 aa21.02■□□□□ 0.96
SNX1-203ENST00000558040 SRGAP3O43295 1099 aa21.01■□□□□ 0.95
SNX1-203ENST00000558040 NTSR2O95665 410 aa21.01■□□□□ 0.95
SNX1-203ENST00000558040 GCC1Q96CN9 775 aa21.01■□□□□ 0.95
SNX1-203ENST00000558040 FAM177BA6PVY3 158 aa21■□□□□ 0.95
SNX1-203ENST00000558040 IRS4O14654 1257 aaPredicted RBP21■□□□□ 0.95
SNX1-203ENST00000558040 RABL6Q3YEC7 729 aaPredicted RBP21■□□□□ 0.95
SNX1-203ENST00000558040 NBPF5PQ86XG9 351 aaPredicted RBP21■□□□□ 0.95
SNX1-203ENST00000558040 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
SNX1-203ENST00000558040 SSH3Q8TE77 659 aa21■□□□□ 0.95
SNX1-203ENST00000558040 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
SNX1-203ENST00000558040 GTF2E1P29083 439 aaPredicted RBP20.99■□□□□ 0.95
SNX1-203ENST00000558040 POLA2Q14181 598 aa20.99■□□□□ 0.95
SNX1-203ENST00000558040 NFIXQ14938 502 aa20.99■□□□□ 0.95
SNX1-203ENST00000558040 PDE8AO60658 829 aa20.98■□□□□ 0.95
SNX1-203ENST00000558040 FOXO4P98177 505 aa20.98■□□□□ 0.95
SNX1-203ENST00000558040 EPHA10Q5JZY3 1008 aa20.98■□□□□ 0.95
SNX1-203ENST00000558040 TPTE2Q6XPS3 522 aa20.98■□□□□ 0.95
SNX1-203ENST00000558040 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
SNX1-203ENST00000558040 NPHP1O15259 732 aa20.97■□□□□ 0.95
SNX1-203ENST00000558040 LMBR1LQ6UX01 489 aa20.97■□□□□ 0.95
SNX1-203ENST00000558040 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
SNX1-203ENST00000558040 LAMB2P55268 1798 aa20.96■□□□□ 0.95
SNX1-203ENST00000558040 CTSWP56202 376 aa20.96■□□□□ 0.95
SNX1-203ENST00000558040 CHMP3Q9Y3E7 222 aa20.96■□□□□ 0.95
SNX1-203ENST00000558040 TM4SF1P30408 202 aa20.95■□□□□ 0.94
SNX1-203ENST00000558040 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
SNX1-203ENST00000558040 NUTM1Q86Y26 1132 aa20.95■□□□□ 0.94
SNX1-203ENST00000558040 SYNE4Q8N205 404 aa20.95■□□□□ 0.94
SNX1-203ENST00000558040 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
SNX1-203ENST00000558040 CNBD1Q8NA66 436 aa20.94■□□□□ 0.94
SNX1-203ENST00000558040 MYH3P11055 1940 aa20.94■□□□□ 0.94
SNX1-203ENST00000558040 CSF1RP07333 972 aa20.93■□□□□ 0.94
SNX1-203ENST00000558040 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
SNX1-203ENST00000558040 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
SNX1-203ENST00000558040 ZBTB47Q9UFB7 747 aaPredicted RBP20.93■□□□□ 0.94
SNX1-203ENST00000558040 DDX60Q8IY21 1712 aaKnown RBP20.92■□□□□ 0.94
SNX1-203ENST00000558040 SURF6O75683 361 aaKnown RBP20.92■□□□□ 0.94
SNX1-203ENST00000558040 SERPINB2P05120 415 aa20.92■□□□□ 0.94
SNX1-203ENST00000558040 CCDC57Q2TAC2 916 aa20.92■□□□□ 0.94
SNX1-203ENST00000558040 TTLL11Q8NHH1 800 aa20.92■□□□□ 0.94
SNX1-203ENST00000558040 POLRMTO00411 1230 aaKnown RBP20.91■□□□□ 0.94
SNX1-203ENST00000558040 RAB11FIP3O75154 756 aa20.91■□□□□ 0.94
SNX1-203ENST00000558040 ST5P78524 1137 aa20.91■□□□□ 0.94
SNX1-203ENST00000558040 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
SNX1-203ENST00000558040 SLC16A10Q8TF71 515 aa20.91■□□□□ 0.94
SNX1-203ENST00000558040 NOP58Q9Y2X3 529 aaKnown RBP20.91■□□□□ 0.94
SNX1-203ENST00000558040 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
SNX1-203ENST00000558040 ABCC12Q96J65 1359 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms