RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
IGKV2D-28-202ENST00000558026 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
IGKV2D-28-202ENST00000558026 CEP290O15078 2479 aa13.39□□□□□ -0.27
IGKV2D-28-202ENST00000558026 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
IGKV2D-28-202ENST00000558026 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
IGKV2D-28-202ENST00000558026 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
IGKV2D-28-202ENST00000558026 FBXO46Q6PJ61 603 aaPredicted RBP13.38□□□□□ -0.27
IGKV2D-28-202ENST00000558026 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
IGKV2D-28-202ENST00000558026 KIAA0100Q14667 2235 aaKnown RBP13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 SHTN1A0MZ66 631 aa13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 GBA2Q9HCG7 927 aaPredicted RBP13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 POLR2AP24928 1970 aaKnown RBP13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
IGKV2D-28-202ENST00000558026 STARD3NLO95772 234 aa13.36□□□□□ -0.27
IGKV2D-28-202ENST00000558026 SLC10A3P09131 477 aa13.36□□□□□ -0.27
IGKV2D-28-202ENST00000558026 TNNT2P45379 298 aaPredicted RBP13.36□□□□□ -0.27
IGKV2D-28-202ENST00000558026 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
IGKV2D-28-202ENST00000558026 MRC1P22897 1456 aa13.36□□□□□ -0.27
IGKV2D-28-202ENST00000558026 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 CXCL9Q07325 125 aa13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 C2orf69Q8N8R5 385 aa13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 HTTP42858 3142 aa13.35□□□□□ -0.27
IGKV2D-28-202ENST00000558026 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
IGKV2D-28-202ENST00000558026 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 A1BGP04217 495 aa13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 AOC3Q16853 763 aa13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 PITPNM2Q9BZ72 1349 aa13.33□□□□□ -0.28
IGKV2D-28-202ENST00000558026 RBBP6Q7Z6E9 1792 aaKnown RBP13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 CENPFP49454 3210 aa13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 ADM5C9JUS6 153 aa13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 PPIP5K2O43314 1243 aa13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 IL6STP40189 918 aaPredicted RBP13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
IGKV2D-28-202ENST00000558026 H0YGN5 161 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 GPR25O00155 361 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 RASAL3Q86YV0 1011 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 BCL2L13Q9BXK5 485 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 BRCA2P51587 3418 aa13.31□□□□□ -0.28
IGKV2D-28-202ENST00000558026 RAD17O75943 681 aa13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
IGKV2D-28-202ENST00000558026 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
IGKV2D-28-202ENST00000558026 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
IGKV2D-28-202ENST00000558026 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
IGKV2D-28-202ENST00000558026 R3HDMLQ9H3Y0 253 aa13.29□□□□□ -0.28
IGKV2D-28-202ENST00000558026 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
IGKV2D-28-202ENST00000558026 EGFRP00533 1210 aa13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 RANBP2P49792 3224 aaKnown RBP13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
IGKV2D-28-202ENST00000558026 CRY2Q49AN0 593 aa13.27□□□□□ -0.29
IGKV2D-28-202ENST00000558026 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
IGKV2D-28-202ENST00000558026 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
IGKV2D-28-202ENST00000558026 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.29
IGKV2D-28-202ENST00000558026 FKTNO75072 461 aa13.26□□□□□ -0.29
IGKV2D-28-202ENST00000558026 TBC1D10BQ4KMP7 808 aaPredicted RBP13.26□□□□□ -0.29
IGKV2D-28-202ENST00000558026 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
IGKV2D-28-202ENST00000558026 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
IGKV2D-28-202ENST00000558026 H7C1D1 291 aa13.25□□□□□ -0.29
IGKV2D-28-202ENST00000558026 CLEC4GQ6UXB4 293 aa13.25□□□□□ -0.29
IGKV2D-28-202ENST00000558026 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
IGKV2D-28-202ENST00000558026 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
IGKV2D-28-202ENST00000558026 PPEF1O14829 653 aaPredicted RBP13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 COL25A1Q9BXS0 654 aaPredicted RBP13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
IGKV2D-28-202ENST00000558026 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 TNIP1Q15025 636 aa13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 ZNF652Q9Y2D9 606 aa13.23□□□□□ -0.29
IGKV2D-28-202ENST00000558026 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 CDCA5Q96FF9 252 aa13.22□□□□□ -0.29
IGKV2D-28-202ENST00000558026 HLFQ16534 295 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms