RNA–Protein interactions for RNA: ENST00000557774.5

NUMB-230, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 847 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-230ENST00000557774 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
NUMB-230ENST00000557774 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 A1BGP04217 495 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 NEFMP07197 916 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 C2CD5Q86YS7 1000 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 TBC1D2BQ9UPU7 963 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
NUMB-230ENST00000557774 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
NUMB-230ENST00000557774 PDE6BP35913 854 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 PBX2P40425 430 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
NUMB-230ENST00000557774 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
NUMB-230ENST00000557774 KCNQ3O43525 872 aa17.09■□□□□ 0.33
NUMB-230ENST00000557774 MCM10Q7L590 875 aa17.09■□□□□ 0.33
NUMB-230ENST00000557774 NMRK2Q9NPI5 230 aa17.09■□□□□ 0.33
NUMB-230ENST00000557774 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
NUMB-230ENST00000557774 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
NUMB-230ENST00000557774 NPHP1O15259 732 aa17.07■□□□□ 0.32
NUMB-230ENST00000557774 LMNB1P20700 586 aa17.07■□□□□ 0.32
NUMB-230ENST00000557774 APLP1P51693 650 aa17.07■□□□□ 0.32
NUMB-230ENST00000557774 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
NUMB-230ENST00000557774 DZIP3Q86Y13 1208 aaKnown RBP17.07■□□□□ 0.32
NUMB-230ENST00000557774 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
NUMB-230ENST00000557774 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
NUMB-230ENST00000557774 CAMTA2O94983 1202 aa17.06■□□□□ 0.32
NUMB-230ENST00000557774 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
NUMB-230ENST00000557774 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
NUMB-230ENST00000557774 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
NUMB-230ENST00000557774 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
NUMB-230ENST00000557774 PRR5LQ6MZQ0 368 aa17.05■□□□□ 0.32
NUMB-230ENST00000557774 CNBD1Q8NA66 436 aa17.05■□□□□ 0.32
NUMB-230ENST00000557774 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
NUMB-230ENST00000557774 ST5P78524 1137 aa17.04■□□□□ 0.32
NUMB-230ENST00000557774 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
NUMB-230ENST00000557774 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
NUMB-230ENST00000557774 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
NUMB-230ENST00000557774 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
NUMB-230ENST00000557774 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 RGL2O15211 777 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 NUDT7P0C024 238 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 RASSF7Q02833 373 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 FSTL1Q12841 308 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
NUMB-230ENST00000557774 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
NUMB-230ENST00000557774 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
NUMB-230ENST00000557774 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
NUMB-230ENST00000557774 STYK1Q6J9G0 422 aa17.01■□□□□ 0.31
NUMB-230ENST00000557774 NBPF5PQ86XG9 351 aaPredicted RBP17.01■□□□□ 0.31
NUMB-230ENST00000557774 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
NUMB-230ENST00000557774 C21orf2O43822 256 aa17■□□□□ 0.31
NUMB-230ENST00000557774 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
NUMB-230ENST00000557774 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
NUMB-230ENST00000557774 SOGA3Q5TF21 947 aa17■□□□□ 0.31
NUMB-230ENST00000557774 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
NUMB-230ENST00000557774 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
NUMB-230ENST00000557774 NFKBIEO00221 500 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 SRGNP10124 158 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 MASTLQ96GX5 879 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 LHX6Q9UPM6 363 aa16.99■□□□□ 0.31
NUMB-230ENST00000557774 SIPA1L3O60292 1781 aaPredicted RBP16.99■□□□□ 0.31
NUMB-230ENST00000557774 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
NUMB-230ENST00000557774 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
NUMB-230ENST00000557774 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
NUMB-230ENST00000557774 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
NUMB-230ENST00000557774 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
NUMB-230ENST00000557774 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
NUMB-230ENST00000557774 MAPK8IP3Q9UPT6 1336 aa16.97■□□□□ 0.31
NUMB-230ENST00000557774 DNAJC5GQ8N7S2 189 aa16.97■□□□□ 0.31
NUMB-230ENST00000557774 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
NUMB-230ENST00000557774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
NUMB-230ENST00000557774 NPR1P16066 1061 aa16.96■□□□□ 0.31
NUMB-230ENST00000557774 PRELPP51888 382 aa16.96■□□□□ 0.31
NUMB-230ENST00000557774 RALBP1Q15311 655 aa16.96■□□□□ 0.31
NUMB-230ENST00000557774 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
NUMB-230ENST00000557774 PRPF40BQ6NWY9 871 aaKnown RBP16.96■□□□□ 0.31
NUMB-230ENST00000557774 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
NUMB-230ENST00000557774 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.3
NUMB-230ENST00000557774 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
NUMB-230ENST00000557774 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
NUMB-230ENST00000557774 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
NUMB-230ENST00000557774 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
NUMB-230ENST00000557774 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
NUMB-230ENST00000557774 ADGRD1Q6QNK2 874 aa16.93■□□□□ 0.3
NUMB-230ENST00000557774 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
NUMB-230ENST00000557774 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
NUMB-230ENST00000557774 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
NUMB-230ENST00000557774 SCN7AQ01118 1682 aa16.93■□□□□ 0.3
NUMB-230ENST00000557774 ALDH1B1P30837 517 aa16.92■□□□□ 0.3
NUMB-230ENST00000557774 HLFQ16534 295 aa16.92■□□□□ 0.3
NUMB-230ENST00000557774 KIF6Q6ZMV9 814 aa16.92■□□□□ 0.3
NUMB-230ENST00000557774 FAM177BA6PVY3 158 aa16.91■□□□□ 0.3
NUMB-230ENST00000557774 RIOK3O14730 519 aaKnown RBP16.91■□□□□ 0.3
NUMB-230ENST00000557774 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
NUMB-230ENST00000557774 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
NUMB-230ENST00000557774 C7orf43Q8WVR3 580 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms