RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
GABRB3-212ENST00000557641 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
GABRB3-212ENST00000557641 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
GABRB3-212ENST00000557641 ZBTB3Q9H5J0 574 aa12.8□□□□□ -0.36
GABRB3-212ENST00000557641 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
GABRB3-212ENST00000557641 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
GABRB3-212ENST00000557641 BTAF1O14981 1849 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 TRIM37O94972 964 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 EVX2Q03828 476 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
GABRB3-212ENST00000557641 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
GABRB3-212ENST00000557641 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
GABRB3-212ENST00000557641 RREB1Q92766 1687 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 COL15A1P39059 1388 aa12.79□□□□□ -0.36
GABRB3-212ENST00000557641 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
GABRB3-212ENST00000557641 MTX1Q13505 466 aa12.78□□□□□ -0.36
GABRB3-212ENST00000557641 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
GABRB3-212ENST00000557641 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
GABRB3-212ENST00000557641 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
GABRB3-212ENST00000557641 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
GABRB3-212ENST00000557641 H7C1W4 665 aa12.77□□□□□ -0.37
GABRB3-212ENST00000557641 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
GABRB3-212ENST00000557641 ARXQ96QS3 562 aa12.77□□□□□ -0.37
GABRB3-212ENST00000557641 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
GABRB3-212ENST00000557641 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
GABRB3-212ENST00000557641 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
GABRB3-212ENST00000557641 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
GABRB3-212ENST00000557641 LY75O60449 1722 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 APBA3O96018 575 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 PCCAP05165 728 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-212ENST00000557641 COL5A3P25940 1745 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-212ENST00000557641 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 AK7Q96M32 723 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
GABRB3-212ENST00000557641 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 GNPATO15228 680 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
GABRB3-212ENST00000557641 HLFQ16534 295 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 HSP90AB4PQ58FF6 505 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-212ENST00000557641 NARFQ9UHQ1 456 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
GABRB3-212ENST00000557641 CASP7P55210 303 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 NUCB1Q02818 461 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 SUCLG2Q96I99 432 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 PDZRN3Q9UPQ7 1066 aa12.73□□□□□ -0.37
GABRB3-212ENST00000557641 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 RAB11FIP3O75154 756 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 ZPR1O75312 459 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 SSFA2P28290 1259 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 KCNQ4P56696 695 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-212ENST00000557641 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
GABRB3-212ENST00000557641 PNMA6EA0A0J9YXQ4 647 aa12.71□□□□□ -0.37
GABRB3-212ENST00000557641 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
GABRB3-212ENST00000557641 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
GABRB3-212ENST00000557641 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
GABRB3-212ENST00000557641 KAZALD1Q96I82 304 aa12.71□□□□□ -0.37
GABRB3-212ENST00000557641 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.37
GABRB3-212ENST00000557641 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
GABRB3-212ENST00000557641 RFC4P35249 363 aa12.7□□□□□ -0.38
GABRB3-212ENST00000557641 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-212ENST00000557641 FLAD1Q8NFF5 587 aa12.7□□□□□ -0.38
GABRB3-212ENST00000557641 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
GABRB3-212ENST00000557641 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
GABRB3-212ENST00000557641 TRMT112Q9UI30 125 aaKnown RBP12.7□□□□□ -0.38
GABRB3-212ENST00000557641 C4BP0C0L5 1744 aa12.7□□□□□ -0.38
GABRB3-212ENST00000557641 GPTP24298 496 aa12.69□□□□□ -0.38
GABRB3-212ENST00000557641 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
GABRB3-212ENST00000557641 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
GABRB3-212ENST00000557641 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
GABRB3-212ENST00000557641 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
GABRB3-212ENST00000557641 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
GABRB3-212ENST00000557641 SH3TC1Q8TE82 1336 aa12.68□□□□□ -0.38
GABRB3-212ENST00000557641 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
GABRB3-212ENST00000557641 SURF6O75683 361 aaKnown RBP12.68□□□□□ -0.38
GABRB3-212ENST00000557641 FOXO4P98177 505 aa12.68□□□□□ -0.38
GABRB3-212ENST00000557641 USPL1Q5W0Q7 1092 aa12.68□□□□□ -0.38
GABRB3-212ENST00000557641 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
GABRB3-212ENST00000557641 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
GABRB3-212ENST00000557641 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-212ENST00000557641 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
GABRB3-212ENST00000557641 PDE8AO60658 829 aa12.67□□□□□ -0.38
GABRB3-212ENST00000557641 CSF1RP07333 972 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms