RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 MPSTP25325 297 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 SCTRP47872 440 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 TMC1Q8TDI8 760 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 PUS7Q96PZ0 661 aaKnown RBP7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 BACH2Q9BYV9 841 aa7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
MTHFD1-216ENST00000557539 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 NDUFB5O43674 189 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 ERCC5P28715 1186 aaPredicted RBP7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 RBCK1Q9BYM8 510 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 NHSL1Q5SYE7 1610 aa7.41□□□□□ -1.22
MTHFD1-216ENST00000557539 UTRNP46939 3433 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 SPINT1O43278 529 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 NPR3P17342 541 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 AGBL1Q96MI9 1066 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 RGS12O14924 1447 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 ADAMTS12P58397 1594 aa7.4□□□□□ -1.22
MTHFD1-216ENST00000557539 WIZO95785 1651 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 SHANK2Q9UPX8 1470 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 FIGNL2A6NMB9 653 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 TTLL8A6PVC2 850 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 ERVH48-1M5A8F1 160 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 BACH1O14867 736 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 DHX9Q08211 1270 aaKnown RBP7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 AAMPQ13685 434 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 SERTAD1Q9UHV2 236 aa7.39□□□□□ -1.23
MTHFD1-216ENST00000557539 ARHGEF40Q8TER5 1519 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 EP400Q96L91 3159 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 LILRA1O75019 489 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 ADD1P35611 737 aaKnown RBP7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 SCNN1DP51172 638 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 GDF10P55107 478 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 C16orf46Q6P387 395 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 KDF1Q8NAX2 398 aaPredicted RBP7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 SAP130Q9H0E3 1048 aa7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 TSPAN10Q9H1Z9 355 aaPredicted RBP7.38□□□□□ -1.23
MTHFD1-216ENST00000557539 WDR7Q9Y4E6 1490 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 FHAD1B1AJZ9 1412 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 SCAMP3O14828 347 aaKnown RBP7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 TREHO43280 583 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 CTSOP43234 321 aaPredicted RBP7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 MAPK8P45983 427 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 RELBQ01201 579 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 XPCQ01831 940 aaPredicted RBP7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 PTSQ03393 145 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 FMR1Q06787 632 aaKnown RBP eCLIP7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 ZSCAN1Q8NBB4 408 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 FAM161BQ96MY7 647 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 CCDC87Q9NVE4 849 aa7.37□□□□□ -1.23
MTHFD1-216ENST00000557539 PPP1R12BO60237 982 aaPredicted RBP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 EIF1AXP47813 144 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 UBXN4Q92575 508 aa7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 OSBPL3Q9H4L5 887 aa7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.23
MTHFD1-216ENST00000557539 AKNAQ7Z591 1439 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 PHLDB1Q86UU1 1377 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 A0A1W2PRU2 124 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 INHAP05111 366 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 TBCELQ5QJ74 424 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 TMEM87AQ8NBN3 555 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 INSM2Q96T92 566 aaPredicted RBP7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 DUSP9Q99956 384 aaKnown RBP7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 UHRF1BP1LA0JNW5 1464 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 SIGLEC1Q9BZZ2 1709 aa7.35□□□□□ -1.23
MTHFD1-216ENST00000557539 ARHGEF12Q9NZN5 1544 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 KDM5BQ9UGL1 1544 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 FZD6O60353 706 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 ADH1AP07327 375 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 CDK11BP21127 795 aaKnown RBP7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 EPHA4P54764 986 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 EHHADHQ08426 723 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 CITED4Q96RK1 184 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 ETNK1Q9HBU6 452 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 TRAPPC8Q9Y2L5 1435 aa7.34□□□□□ -1.23
MTHFD1-216ENST00000557539 SLC35F4A4IF30 521 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms