RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 DLK2Q6UY11 383 aa13.08□□□□□ -0.32
NEDD1-211ENST00000557454 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
NEDD1-211ENST00000557454 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
NEDD1-211ENST00000557454 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
NEDD1-211ENST00000557454 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
NEDD1-211ENST00000557454 AEBP1Q8IUX7 1158 aa13.07□□□□□ -0.32
NEDD1-211ENST00000557454 CSRNP1Q96S65 589 aa13.07□□□□□ -0.32
NEDD1-211ENST00000557454 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
NEDD1-211ENST00000557454 KLRG2A4D1S0 409 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-211ENST00000557454 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 ZNF157P51786 506 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-211ENST00000557454 HIRAP54198 1017 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-211ENST00000557454 FBXO46Q6PJ61 603 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-211ENST00000557454 VSIG10Q8N0Z9 540 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 ZNF296Q8WUU4 475 aaPredicted RBP13.06□□□□□ -0.32
NEDD1-211ENST00000557454 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 CENPFP49454 3210 aa13.06□□□□□ -0.32
NEDD1-211ENST00000557454 MRC1P22897 1456 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 STARD3NLO95772 234 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
NEDD1-211ENST00000557454 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 USP48Q86UV5 1035 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 GBA2Q9HCG7 927 aaPredicted RBP13.05□□□□□ -0.32
NEDD1-211ENST00000557454 CEP290O15078 2479 aa13.05□□□□□ -0.32
NEDD1-211ENST00000557454 SLC10A3P09131 477 aa13.04□□□□□ -0.32
NEDD1-211ENST00000557454 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
NEDD1-211ENST00000557454 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
NEDD1-211ENST00000557454 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
NEDD1-211ENST00000557454 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
NEDD1-211ENST00000557454 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
NEDD1-211ENST00000557454 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
NEDD1-211ENST00000557454 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
NEDD1-211ENST00000557454 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
NEDD1-211ENST00000557454 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
NEDD1-211ENST00000557454 C2orf69Q8N8R5 385 aa13.02□□□□□ -0.33
NEDD1-211ENST00000557454 TBC1D8O95759 1140 aa13.01□□□□□ -0.33
NEDD1-211ENST00000557454 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 SHTN1A0MZ66 631 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
NEDD1-211ENST00000557454 PPIP5K2O43314 1243 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 CXCL9Q07325 125 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 AOC3Q16853 763 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
NEDD1-211ENST00000557454 KIAA0100Q14667 2235 aaKnown RBP12.99□□□□□ -0.33
NEDD1-211ENST00000557454 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
NEDD1-211ENST00000557454 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-211ENST00000557454 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
NEDD1-211ENST00000557454 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
NEDD1-211ENST00000557454 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
NEDD1-211ENST00000557454 RASAL3Q86YV0 1011 aa12.99□□□□□ -0.33
NEDD1-211ENST00000557454 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 A1BGP04217 495 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
NEDD1-211ENST00000557454 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 GPR25O00155 361 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 EN2P19622 333 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-211ENST00000557454 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-211ENST00000557454 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-211ENST00000557454 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
NEDD1-211ENST00000557454 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
NEDD1-211ENST00000557454 H0YGN5 161 aa12.96□□□□□ -0.33
NEDD1-211ENST00000557454 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
NEDD1-211ENST00000557454 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
NEDD1-211ENST00000557454 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
NEDD1-211ENST00000557454 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
NEDD1-211ENST00000557454 RAD17O75943 681 aa12.95□□□□□ -0.34
NEDD1-211ENST00000557454 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-211ENST00000557454 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
NEDD1-211ENST00000557454 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
NEDD1-211ENST00000557454 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
NEDD1-211ENST00000557454 CNOT7Q9UIV1 285 aaKnown RBP12.95□□□□□ -0.34
NEDD1-211ENST00000557454 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEDD1-211ENST00000557454 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
NEDD1-211ENST00000557454 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 FKTNO75072 461 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
NEDD1-211ENST00000557454 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 SAMD7Q7Z3H4 446 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
NEDD1-211ENST00000557454 H7C1D1 291 aa12.93□□□□□ -0.34
NEDD1-211ENST00000557454 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-211ENST00000557454 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-211ENST00000557454 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
NEDD1-211ENST00000557454 EGFRP00533 1210 aa12.92□□□□□ -0.34
NEDD1-211ENST00000557454 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-211ENST00000557454 TBC1D10BQ4KMP7 808 aaPredicted RBP12.92□□□□□ -0.34
NEDD1-211ENST00000557454 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
NEDD1-211ENST00000557454 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms