RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 SASH1O94885 1247 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 MBD3O95983 291 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 FSD2A1L4K1 749 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 CYP27B1O15528 508 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 ANAPC15P60006 121 aa18.32■□□□□ 0.52
TMEM55B-207ENST00000557041 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 ATP6V1DQ9Y5K8 247 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 RAD50Q92878 1312 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 SYT1P21579 422 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 ANKRD26Q9UPS8 1709 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 PSMA5P28066 241 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 DNM1Q05193 864 aaKnown RBP18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 POLA2Q14181 598 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
TMEM55B-207ENST00000557041 HAND2P61296 217 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 BICD2Q8TD16 824 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 LARGE1O95461 756 aa18.3■□□□□ 0.52
TMEM55B-207ENST00000557041 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 METTL22Q9BUU2 404 aaPredicted RBP18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 TSPY26PQ9H489 355 aa18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 NRKQ7Z2Y5 1582 aa18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 DDIT3P35638 169 aa18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 RUFY3Q7L099 469 aa18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
TMEM55B-207ENST00000557041 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 PHF14O94880 888 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 GIMAP6Q6P9H5 292 aa18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 BCL11BQ9C0K0 894 aaPredicted RBP18.28■□□□□ 0.52
TMEM55B-207ENST00000557041 CCDC171Q6TFL3 1326 aa18.27■□□□□ 0.52
TMEM55B-207ENST00000557041 HIP1O00291 1037 aa18.27■□□□□ 0.52
TMEM55B-207ENST00000557041 ADAMTS2O95450 1211 aa18.27■□□□□ 0.52
TMEM55B-207ENST00000557041 IFIT1P09914 478 aaKnown RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
TMEM55B-207ENST00000557041 BRD1O95696 1058 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 USP25Q9UHP3 1055 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 NPHP1O15259 732 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 BRF1Q92994 677 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
TMEM55B-207ENST00000557041 TNNI3KQ59H18 835 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 FPGT-TNNI3KV9GXZ4 949 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 ME3Q16798 604 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 C3P01024 1663 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 SLC27A2O14975 620 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
TMEM55B-207ENST00000557041 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
TMEM55B-207ENST00000557041 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
TMEM55B-207ENST00000557041 TBC1D2BQ9UPU7 963 aa18.23■□□□□ 0.51
TMEM55B-207ENST00000557041 HELBQ8NG08 1087 aaPredicted RBP18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 PXDNQ92626 1479 aa18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 IDH1O75874 414 aaKnown RBP18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
TMEM55B-207ENST00000557041 LRSAM1Q6UWE0 723 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 F13A1P00488 732 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 CSPP1Q1MSJ5 1256 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 NEK1Q96PY6 1258 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 IL2RBP14784 551 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 ZSCAN31Q96LW9 406 aaPredicted RBP18.21■□□□□ 0.51
TMEM55B-207ENST00000557041 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 KRT85P78386 507 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1669.6 ms