RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SOX10P56693 466 aa18.34■□□□□ 0.53
TRAPPC6B-206ENST00000556765 RIPK4P57078 832 aa18.34■□□□□ 0.53
TRAPPC6B-206ENST00000556765 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
TRAPPC6B-206ENST00000556765 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.53
TRAPPC6B-206ENST00000556765 A0A087WZG4 1122 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 NEUROD2Q15784 382 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 CST9Q5W186 159 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 GPC2Q8N158 579 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 CNBD1Q8NA66 436 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 PPP4R2Q9NY27 417 aa18.33■□□□□ 0.52
TRAPPC6B-206ENST00000556765 FZD9O00144 591 aa18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 NPHP1O15259 732 aa18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 AEBP1Q8IUX7 1158 aa18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 TRAF5O00463 557 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 HMOX1P09601 288 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 ST5P78524 1137 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 TRPM7Q96QT4 1865 aa18.31■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
TRAPPC6B-206ENST00000556765 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
TRAPPC6B-206ENST00000556765 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
TRAPPC6B-206ENST00000556765 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
TRAPPC6B-206ENST00000556765 MRC1P22897 1456 aa18.28■□□□□ 0.52
TRAPPC6B-206ENST00000556765 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC6B-206ENST00000556765 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
TRAPPC6B-206ENST00000556765 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SETDB2Q96T68 719 aa18.28■□□□□ 0.52
TRAPPC6B-206ENST00000556765 STARD3NLO95772 234 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 CIAPIN1Q6FI81 312 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 OLFM4Q6UX06 510 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SAPCD2Q86UD0 394 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 LGR6Q9HBX8 967 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 GJA3Q9Y6H8 435 aa18.27■□□□□ 0.52
TRAPPC6B-206ENST00000556765 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
TRAPPC6B-206ENST00000556765 GNAI1P63096 354 aa18.26■□□□□ 0.51
TRAPPC6B-206ENST00000556765 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
TRAPPC6B-206ENST00000556765 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC6B-206ENST00000556765 NPR1P16066 1061 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 EPS15P42566 896 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 JDP2Q8WYK2 163 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
TRAPPC6B-206ENST00000556765 CELF2O95319 508 aaKnown RBP18.24■□□□□ 0.51
TRAPPC6B-206ENST00000556765 SCNN1DP51172 638 aa18.24■□□□□ 0.51
TRAPPC6B-206ENST00000556765 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
TRAPPC6B-206ENST00000556765 USP50Q70EL3 339 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC6B-206ENST00000556765 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
TRAPPC6B-206ENST00000556765 RNMTO43148 476 aaKnown RBP18.23■□□□□ 0.51
TRAPPC6B-206ENST00000556765 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
TRAPPC6B-206ENST00000556765 CAMTA2O94983 1202 aa18.21■□□□□ 0.51
TRAPPC6B-206ENST00000556765 MS4A1P11836 297 aa18.21■□□□□ 0.51
TRAPPC6B-206ENST00000556765 UBR2Q8IWV8 1755 aa18.21■□□□□ 0.51
TRAPPC6B-206ENST00000556765 COL4A5P29400 1685 aa18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 NOGQ13253 232 aa18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 AAMPQ13685 434 aa18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 NBPF5PQ86XG9 351 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 PSMD1Q99460 953 aa18.2■□□□□ 0.5
TRAPPC6B-206ENST00000556765 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 PDE3AQ14432 1141 aa18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 RTF1Q92541 710 aaKnown RBP18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ZIC5Q96T25 663 aa18.19■□□□□ 0.5
TRAPPC6B-206ENST00000556765 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
TRAPPC6B-206ENST00000556765 RARSP54136 660 aaKnown RBP18.18■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ALDH1L2Q3SY69 923 aa18.18■□□□□ 0.5
TRAPPC6B-206ENST00000556765 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
TRAPPC6B-206ENST00000556765 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
TRAPPC6B-206ENST00000556765 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
TRAPPC6B-206ENST00000556765 TEX13AQ9BXU3 409 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC6B-206ENST00000556765 GLIS2Q9BZE0 524 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ADARB2Q9NS39 739 aaKnown RBP18.16■□□□□ 0.5
TRAPPC6B-206ENST00000556765 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
TRAPPC6B-206ENST00000556765 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
TRAPPC6B-206ENST00000556765 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC6B-206ENST00000556765 SAGE1Q9NXZ1 904 aa18.15■□□□□ 0.5
TRAPPC6B-206ENST00000556765 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
TRAPPC6B-206ENST00000556765 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
TRAPPC6B-206ENST00000556765 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
TRAPPC6B-206ENST00000556765 GNAT3A8MTJ3 354 aa18.13■□□□□ 0.49
TRAPPC6B-206ENST00000556765 A1BGP04217 495 aa18.13■□□□□ 0.49
TRAPPC6B-206ENST00000556765 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
TRAPPC6B-206ENST00000556765 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
TRAPPC6B-206ENST00000556765 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
TRAPPC6B-206ENST00000556765 GPRC5DQ9NZD1 345 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms