RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 ABCC12Q96J65 1359 aa13.83□□□□□ -0.19
IFT43-212ENST00000556742 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
IFT43-212ENST00000556742 NPR1P16066 1061 aa13.83□□□□□ -0.2
IFT43-212ENST00000556742 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
IFT43-212ENST00000556742 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
IFT43-212ENST00000556742 CNKSR1Q969H4 720 aa13.83□□□□□ -0.2
IFT43-212ENST00000556742 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
IFT43-212ENST00000556742 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
IFT43-212ENST00000556742 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
IFT43-212ENST00000556742 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
IFT43-212ENST00000556742 ZNF784Q8NCA9 323 aaPredicted RBP13.82□□□□□ -0.2
IFT43-212ENST00000556742 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
IFT43-212ENST00000556742 STK31Q9BXU1 1019 aa13.82□□□□□ -0.2
IFT43-212ENST00000556742 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
IFT43-212ENST00000556742 DDX58O95786 925 aaKnown RBP13.81□□□□□ -0.2
IFT43-212ENST00000556742 TRIM28Q13263 835 aaKnown RBP13.81□□□□□ -0.2
IFT43-212ENST00000556742 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
IFT43-212ENST00000556742 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
IFT43-212ENST00000556742 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
IFT43-212ENST00000556742 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
IFT43-212ENST00000556742 ALDH1B1P30837 517 aa13.8□□□□□ -0.2
IFT43-212ENST00000556742 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
IFT43-212ENST00000556742 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
IFT43-212ENST00000556742 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
IFT43-212ENST00000556742 TAF1P21675 1872 aa13.8□□□□□ -0.2
IFT43-212ENST00000556742 VAMP4O75379 141 aa13.79□□□□□ -0.2
IFT43-212ENST00000556742 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
IFT43-212ENST00000556742 EXOSC9Q06265 439 aaKnown RBP13.79□□□□□ -0.2
IFT43-212ENST00000556742 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
IFT43-212ENST00000556742 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
IFT43-212ENST00000556742 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
IFT43-212ENST00000556742 LTBP3Q9NS15 1303 aa13.78□□□□□ -0.2
IFT43-212ENST00000556742 LRRC37AA6NMS7 1700 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 E9PSI1 815 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 C21orf2O43822 256 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 MIER1Q8N108 512 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 C7orf43Q8WVR3 580 aa13.77□□□□□ -0.21
IFT43-212ENST00000556742 RPGRQ92834 1020 aaKnown RBP13.77□□□□□ -0.21
IFT43-212ENST00000556742 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
IFT43-212ENST00000556742 ATP5J2-PTCD1G3V325 749 aa13.76□□□□□ -0.21
IFT43-212ENST00000556742 NFKBIEO00221 500 aa13.76□□□□□ -0.21
IFT43-212ENST00000556742 LMNB1P20700 586 aa13.76□□□□□ -0.21
IFT43-212ENST00000556742 CCDC191Q8NCU4 936 aa13.76□□□□□ -0.21
IFT43-212ENST00000556742 CRAMP1Q96RY5 1269 aa13.76□□□□□ -0.21
IFT43-212ENST00000556742 METTL22Q9BUU2 404 aaPredicted RBP13.76□□□□□ -0.21
IFT43-212ENST00000556742 PI4KAP2A4QPH2 592 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 FLIIQ13045 1269 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 PI4KAP1Q8N8J0 262 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 RBM17Q96I25 401 aaKnown RBP13.75□□□□□ -0.21
IFT43-212ENST00000556742 MAP3K2Q9Y2U5 619 aa13.75□□□□□ -0.21
IFT43-212ENST00000556742 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 TCERG1O14776 1098 aaKnown RBP13.74□□□□□ -0.21
IFT43-212ENST00000556742 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
IFT43-212ENST00000556742 RASSF7Q02833 373 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 G2E3Q7L622 706 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
IFT43-212ENST00000556742 MYD88Q99836 296 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
IFT43-212ENST00000556742 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
IFT43-212ENST00000556742 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
IFT43-212ENST00000556742 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 FAM89AQ96GI7 184 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
IFT43-212ENST00000556742 CWC25Q9NXE8 425 aaPredicted RBP13.73□□□□□ -0.21
IFT43-212ENST00000556742 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
IFT43-212ENST00000556742 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
IFT43-212ENST00000556742 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
IFT43-212ENST00000556742 PRELPP51888 382 aa13.72□□□□□ -0.21
IFT43-212ENST00000556742 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
IFT43-212ENST00000556742 SF3B3Q15393 1217 aaKnown RBP13.72□□□□□ -0.21
IFT43-212ENST00000556742 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
IFT43-212ENST00000556742 SPEF2Q9C093 1822 aa13.71□□□□□ -0.21
IFT43-212ENST00000556742 ABCC4O15439 1325 aa13.71□□□□□ -0.21
IFT43-212ENST00000556742 CDHR2Q9BYE9 1310 aa13.71□□□□□ -0.21
IFT43-212ENST00000556742 IRS4O14654 1257 aaPredicted RBP13.71□□□□□ -0.21
IFT43-212ENST00000556742 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
IFT43-212ENST00000556742 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.21
IFT43-212ENST00000556742 PSMD1Q99460 953 aa13.71□□□□□ -0.21
IFT43-212ENST00000556742 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 NEURL1BA8MQ27 555 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
IFT43-212ENST00000556742 BBOX1O75936 387 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 DNAAF4Q8WXU2 420 aa13.7□□□□□ -0.22
IFT43-212ENST00000556742 SCN4AP35499 1836 aa13.69□□□□□ -0.22
IFT43-212ENST00000556742 KDM2BQ8NHM5 1336 aa13.69□□□□□ -0.22
IFT43-212ENST00000556742 CT47B1P0C2W7 299 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms