RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 SIL1Q9H173 461 aa17.12■□□□□ 0.33
EFCAB11-212ENST00000556639 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
EFCAB11-212ENST00000556639 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
EFCAB11-212ENST00000556639 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
EFCAB11-212ENST00000556639 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 UBN2Q6ZU65 1347 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 ERVV-1B6SEH8 477 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 COL15A1P39059 1388 aa17.1■□□□□ 0.33
EFCAB11-212ENST00000556639 ZNF831Q5JPB2 1677 aa17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 FBXO41Q8TF61 875 aa17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 CHMP3Q9Y3E7 222 aa17.09■□□□□ 0.33
EFCAB11-212ENST00000556639 LY75O60449 1722 aa17.08■□□□□ 0.33
EFCAB11-212ENST00000556639 POTEAQ6S8J7 498 aa17.08■□□□□ 0.33
EFCAB11-212ENST00000556639 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.33
EFCAB11-212ENST00000556639 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.33
EFCAB11-212ENST00000556639 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
EFCAB11-212ENST00000556639 SASH1O94885 1247 aa17.08■□□□□ 0.32
EFCAB11-212ENST00000556639 ANKRD36CQ5JPF3 1778 aa17.08■□□□□ 0.32
EFCAB11-212ENST00000556639 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 RXRBP28702 533 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 PDE1AP54750 535 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 GNPATO15228 680 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 ZBTB38Q8NAP3 1195 aaPredicted RBP17.07■□□□□ 0.32
EFCAB11-212ENST00000556639 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
EFCAB11-212ENST00000556639 ZNF594Q96JF6 807 aaPredicted RBP17.06■□□□□ 0.32
EFCAB11-212ENST00000556639 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
EFCAB11-212ENST00000556639 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
EFCAB11-212ENST00000556639 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
EFCAB11-212ENST00000556639 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
EFCAB11-212ENST00000556639 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 MX1P20591 662 aa17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 NIP7Q9Y221 180 aaKnown RBP eCLIP17.04■□□□□ 0.32
EFCAB11-212ENST00000556639 PHF14O94880 888 aa17.03■□□□□ 0.32
EFCAB11-212ENST00000556639 PROM2Q8N271 834 aa17.03■□□□□ 0.32
EFCAB11-212ENST00000556639 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
EFCAB11-212ENST00000556639 SDSP20132 328 aa17.02■□□□□ 0.32
EFCAB11-212ENST00000556639 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
EFCAB11-212ENST00000556639 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
EFCAB11-212ENST00000556639 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.31
EFCAB11-212ENST00000556639 BICDL1Q6ZP65 573 aa17.02■□□□□ 0.31
EFCAB11-212ENST00000556639 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.31
EFCAB11-212ENST00000556639 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.31
EFCAB11-212ENST00000556639 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 CCDC8Q9H0W5 538 aaPredicted RBP17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 RTCBQ9Y3I0 505 aaKnown RBP17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 CDHR2Q9BYE9 1310 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 TFCP2Q12800 502 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 BCORQ6W2J9 1755 aa17.01■□□□□ 0.31
EFCAB11-212ENST00000556639 CSF1RP07333 972 aa17■□□□□ 0.31
EFCAB11-212ENST00000556639 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
EFCAB11-212ENST00000556639 TBC1D9Q6ZT07 1266 aa17■□□□□ 0.31
EFCAB11-212ENST00000556639 AACSQ86V21 672 aa17■□□□□ 0.31
EFCAB11-212ENST00000556639 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
EFCAB11-212ENST00000556639 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
EFCAB11-212ENST00000556639 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 TTLL11Q8NHH1 800 aa16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 GREM2Q9H772 168 aa16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 NTSR2O95665 410 aa16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
EFCAB11-212ENST00000556639 PI4K2BQ8TCG2 481 aa16.98■□□□□ 0.31
EFCAB11-212ENST00000556639 AK7Q96M32 723 aa16.98■□□□□ 0.31
EFCAB11-212ENST00000556639 CTSWP56202 376 aa16.98■□□□□ 0.31
EFCAB11-212ENST00000556639 TXNRD1Q16881 649 aa16.98■□□□□ 0.31
EFCAB11-212ENST00000556639 APBA3O96018 575 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 SH3TC1Q8TE82 1336 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 PDE8AO60658 829 aa16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
EFCAB11-212ENST00000556639 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms