RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 H7C1W4 665 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.13
FOXN3-212ENST00000556541 GNAI3P08754 354 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 TBC1D9BQ66K14 1250 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 TNNQ9UQP3 1299 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
FOXN3-212ENST00000556541 LRP5O75197 1615 aa14.21□□□□□ -0.13
FOXN3-212ENST00000556541 PSDA5PKW4 1024 aaPredicted RBP14.2□□□□□ -0.14
FOXN3-212ENST00000556541 GRM8O00222 908 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 ZBTB7BO15156 539 aaPredicted RBP14.2□□□□□ -0.14
FOXN3-212ENST00000556541 NTSR2O95665 410 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 CASP7P55210 303 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 NFIXQ14938 502 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 C20orf194Q5TEA3 1177 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 SMIM5Q71RC9 77 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 ZBTB38Q8NAP3 1195 aaPredicted RBP14.2□□□□□ -0.14
FOXN3-212ENST00000556541 ARXQ96QS3 562 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 PLA2G12BQ9BX93 195 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
FOXN3-212ENST00000556541 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
FOXN3-212ENST00000556541 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
FOXN3-212ENST00000556541 ITPRIPQ8IWB1 547 aa14.19□□□□□ -0.14
FOXN3-212ENST00000556541 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
FOXN3-212ENST00000556541 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
FOXN3-212ENST00000556541 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
FOXN3-212ENST00000556541 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
FOXN3-212ENST00000556541 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
FOXN3-212ENST00000556541 TPTE2Q6XPS3 522 aa14.18□□□□□ -0.14
FOXN3-212ENST00000556541 ZBTB40Q9NUA8 1239 aa14.18□□□□□ -0.14
FOXN3-212ENST00000556541 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
FOXN3-212ENST00000556541 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
FOXN3-212ENST00000556541 MSH5O43196 834 aa14.17□□□□□ -0.14
FOXN3-212ENST00000556541 C9orf78Q9NZ63 289 aaPredicted RBP14.17□□□□□ -0.14
FOXN3-212ENST00000556541 COG6Q9Y2V7 657 aa14.17□□□□□ -0.14
FOXN3-212ENST00000556541 GPTP24298 496 aa14.16□□□□□ -0.14
FOXN3-212ENST00000556541 DDR1Q08345 913 aa14.16□□□□□ -0.14
FOXN3-212ENST00000556541 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
FOXN3-212ENST00000556541 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
FOXN3-212ENST00000556541 RTL9Q8NET4 1388 aa14.16□□□□□ -0.14
FOXN3-212ENST00000556541 DLEC1Q9Y238 1755 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 SERPINB2P05120 415 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 NEFLP07196 543 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 MMP10P09238 476 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 UBTFL1P0CB47 393 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-212ENST00000556541 MTX1Q13505 466 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 RABL6Q3YEC7 729 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-212ENST00000556541 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
FOXN3-212ENST00000556541 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 MEIS3Q99687 375 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 SGIP1Q9BQI5 828 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 PARP3Q9Y6F1 533 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
FOXN3-212ENST00000556541 KLRG2A4D1S0 409 aaPredicted RBP14.14□□□□□ -0.15
FOXN3-212ENST00000556541 GNAI2P04899 355 aa14.14□□□□□ -0.15
FOXN3-212ENST00000556541 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
FOXN3-212ENST00000556541 PRR5LQ6MZQ0 368 aa14.14□□□□□ -0.15
FOXN3-212ENST00000556541 UBE3BQ7Z3V4 1068 aa14.14□□□□□ -0.15
FOXN3-212ENST00000556541 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
FOXN3-212ENST00000556541 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
FOXN3-212ENST00000556541 PDE8AO60658 829 aa14.13□□□□□ -0.15
FOXN3-212ENST00000556541 ST5P78524 1137 aa14.13□□□□□ -0.15
FOXN3-212ENST00000556541 TNRC6CQ9HCJ0 1690 aaKnown RBP14.13□□□□□ -0.15
FOXN3-212ENST00000556541 ABCC12Q96J65 1359 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 IRS4O14654 1257 aaPredicted RBP14.12□□□□□ -0.15
FOXN3-212ENST00000556541 CSF1RP07333 972 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 POLD1P28340 1107 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 SF3B3Q15393 1217 aaKnown RBP14.12□□□□□ -0.15
FOXN3-212ENST00000556541 BICDL1Q6ZP65 573 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
FOXN3-212ENST00000556541 FAM89AQ96GI7 184 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 KAZALD1Q96I82 304 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 BRIP1Q9BX63 1249 aa14.12□□□□□ -0.15
FOXN3-212ENST00000556541 FOXO4P98177 505 aa14.11□□□□□ -0.15
FOXN3-212ENST00000556541 CRY2Q49AN0 593 aa14.11□□□□□ -0.15
FOXN3-212ENST00000556541 KIAA1551Q9HCM1 1747 aa14.11□□□□□ -0.15
FOXN3-212ENST00000556541 PTGER2P43116 358 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 CTSWP56202 376 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 EXOC6Q8TAG9 804 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 SUCLG2Q96I99 432 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
FOXN3-212ENST00000556541 LRRFIP2Q9Y608 721 aaKnown RBP14.1□□□□□ -0.15
FOXN3-212ENST00000556541 COL11A2P13942 1736 aaPredicted RBP14.1□□□□□ -0.15
FOXN3-212ENST00000556541 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
FOXN3-212ENST00000556541 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
FOXN3-212ENST00000556541 PDE6BP35913 854 aa14.09□□□□□ -0.15
FOXN3-212ENST00000556541 ANKRD44Q8N8A2 993 aa14.09□□□□□ -0.15
FOXN3-212ENST00000556541 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
FOXN3-212ENST00000556541 BRCA1P38398 1863 aaKnown RBP14.09□□□□□ -0.15
FOXN3-212ENST00000556541 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
FOXN3-212ENST00000556541 ATP8B2P98198 1209 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 CCDC152Q4G0S7 254 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 CEP85Q6P2H3 762 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
FOXN3-212ENST00000556541 TTLL11Q8NHH1 800 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms