RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
TUBB3-211ENST00000556536 TMEM57Q8N5G2 664 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 PXDNLA1KZ92 1463 aa22.05■■□□□ 1.12
TUBB3-211ENST00000556536 IFFO2Q5TF58 517 aa22.05■■□□□ 1.12
TUBB3-211ENST00000556536 SETDB2Q96T68 719 aa22.05■■□□□ 1.12
TUBB3-211ENST00000556536 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
TUBB3-211ENST00000556536 FAM177BA6PVY3 158 aa22.04■■□□□ 1.12
TUBB3-211ENST00000556536 MMP10P09238 476 aa22.04■■□□□ 1.12
TUBB3-211ENST00000556536 CCT4P50991 539 aaKnown RBP22.04■■□□□ 1.12
TUBB3-211ENST00000556536 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
TUBB3-211ENST00000556536 INTS3Q68E01 1043 aaKnown RBP22.04■■□□□ 1.12
TUBB3-211ENST00000556536 KLHL34Q8N239 644 aa22.04■■□□□ 1.12
TUBB3-211ENST00000556536 CEP350Q5VT06 3117 aa22.04■■□□□ 1.12
TUBB3-211ENST00000556536 COL24A1Q17RW2 1714 aa22.03■■□□□ 1.12
TUBB3-211ENST00000556536 POLRMTO00411 1230 aaKnown RBP22.03■■□□□ 1.12
TUBB3-211ENST00000556536 ALDH1L1O75891 902 aa22.03■■□□□ 1.12
TUBB3-211ENST00000556536 PDE3AQ14432 1141 aa22.03■■□□□ 1.12
TUBB3-211ENST00000556536 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
TUBB3-211ENST00000556536 CWC25Q9NXE8 425 aaPredicted RBP22.03■■□□□ 1.12
TUBB3-211ENST00000556536 NUP98P52948 1817 aa22.02■■□□□ 1.12
TUBB3-211ENST00000556536 MS4A1P11836 297 aa22.02■■□□□ 1.12
TUBB3-211ENST00000556536 GCKRQ14397 625 aa22.02■■□□□ 1.12
TUBB3-211ENST00000556536 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
TUBB3-211ENST00000556536 CARMIL3Q8ND23 1372 aa22.01■■□□□ 1.11
TUBB3-211ENST00000556536 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
TUBB3-211ENST00000556536 JARID2Q92833 1246 aaPredicted RBP22.01■■□□□ 1.11
TUBB3-211ENST00000556536 NTSR2O95665 410 aa22■■□□□ 1.11
TUBB3-211ENST00000556536 SERPINB2P05120 415 aa22■■□□□ 1.11
TUBB3-211ENST00000556536 COG6Q9Y2V7 657 aa22■■□□□ 1.11
TUBB3-211ENST00000556536 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
TUBB3-211ENST00000556536 ITPRIPQ8IWB1 547 aa21.99■■□□□ 1.11
TUBB3-211ENST00000556536 SYNE4Q8N205 404 aa21.99■■□□□ 1.11
TUBB3-211ENST00000556536 UTP14AQ9BVJ6 771 aaKnown RBP21.99■■□□□ 1.11
TUBB3-211ENST00000556536 TRMT112Q9UI30 125 aaKnown RBP21.99■■□□□ 1.11
TUBB3-211ENST00000556536 PARP3Q9Y6F1 533 aa21.99■■□□□ 1.11
TUBB3-211ENST00000556536 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
TUBB3-211ENST00000556536 PPP1R42Q7Z4L9 355 aa21.98■■□□□ 1.11
TUBB3-211ENST00000556536 NUTM1Q86Y26 1132 aa21.98■■□□□ 1.11
TUBB3-211ENST00000556536 FAM89AQ96GI7 184 aa21.98■■□□□ 1.11
TUBB3-211ENST00000556536 ANKRD36CQ5JPF3 1778 aa21.97■■□□□ 1.11
TUBB3-211ENST00000556536 H7C1W4 665 aa21.97■■□□□ 1.11
TUBB3-211ENST00000556536 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
TUBB3-211ENST00000556536 CCDC24Q8N4L8 307 aa21.97■■□□□ 1.11
TUBB3-211ENST00000556536 ZBTB38Q8NAP3 1195 aaPredicted RBP21.97■■□□□ 1.11
TUBB3-211ENST00000556536 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
TUBB3-211ENST00000556536 IBTKQ9P2D0 1353 aaPredicted RBP21.97■■□□□ 1.11
TUBB3-211ENST00000556536 GRM8O00222 908 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 PCCAP05165 728 aaPredicted RBP21.96■■□□□ 1.11
TUBB3-211ENST00000556536 IRX6P78412 446 aaPredicted RBP21.96■■□□□ 1.11
TUBB3-211ENST00000556536 ERFEQ4G0M1 354 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 PRR5LQ6MZQ0 368 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 TPTE2Q6XPS3 522 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 NLGN2Q8NFZ4 835 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 MEIS3Q99687 375 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 NYXQ9GZU5 481 aa21.96■■□□□ 1.11
TUBB3-211ENST00000556536 C9orf78Q9NZ63 289 aaPredicted RBP21.96■■□□□ 1.11
TUBB3-211ENST00000556536 GRIN3BO60391 1043 aa21.95■■□□□ 1.1
TUBB3-211ENST00000556536 NBPF7P0C2Y1 421 aaPredicted RBP21.95■■□□□ 1.1
TUBB3-211ENST00000556536 CASP7P55210 303 aa21.95■■□□□ 1.1
TUBB3-211ENST00000556536 UBE3BQ7Z3V4 1068 aa21.95■■□□□ 1.1
TUBB3-211ENST00000556536 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
TUBB3-211ENST00000556536 CRBNQ96SW2 442 aa21.95■■□□□ 1.1
TUBB3-211ENST00000556536 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
TUBB3-211ENST00000556536 UTYO14607 1347 aa21.94■■□□□ 1.1
TUBB3-211ENST00000556536 SH3TC1Q8TE82 1336 aa21.94■■□□□ 1.1
TUBB3-211ENST00000556536 ABCC12Q96J65 1359 aa21.94■■□□□ 1.1
TUBB3-211ENST00000556536 GTF2E1P29083 439 aaPredicted RBP21.93■■□□□ 1.1
TUBB3-211ENST00000556536 NPHP1O15259 732 aa21.92■■□□□ 1.1
TUBB3-211ENST00000556536 HCLS1P14317 486 aaPredicted RBP21.92■■□□□ 1.1
TUBB3-211ENST00000556536 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
TUBB3-211ENST00000556536 IRS4O14654 1257 aaPredicted RBP21.91■■□□□ 1.1
TUBB3-211ENST00000556536 DDX19BQ9UMR2 479 aa21.91■■□□□ 1.1
TUBB3-211ENST00000556536 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
TUBB3-211ENST00000556536 CDHR2Q9BYE9 1310 aa21.9■■□□□ 1.1
TUBB3-211ENST00000556536 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
TUBB3-211ENST00000556536 ST5P78524 1137 aa21.9■■□□□ 1.1
TUBB3-211ENST00000556536 SLC10A5Q5PT55 438 aa21.9■■□□□ 1.1
TUBB3-211ENST00000556536 SUCLG2Q96I99 432 aa21.9■■□□□ 1.1
TUBB3-211ENST00000556536 GNAI3P08754 354 aa21.89■■□□□ 1.09
TUBB3-211ENST00000556536 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.09
TUBB3-211ENST00000556536 C3orf67Q6ZVT6 689 aa21.89■■□□□ 1.09
TUBB3-211ENST00000556536 KAZALD1Q96I82 304 aa21.89■■□□□ 1.09
TUBB3-211ENST00000556536 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.09
TUBB3-211ENST00000556536 EPHA10Q5JZY3 1008 aa21.88■■□□□ 1.09
TUBB3-211ENST00000556536 EXOC6Q8TAG9 804 aa21.88■■□□□ 1.09
TUBB3-211ENST00000556536 C1orf115Q9H7X2 142 aa21.87■■□□□ 1.09
TUBB3-211ENST00000556536 ZBTB40Q9NUA8 1239 aa21.87■■□□□ 1.09
TUBB3-211ENST00000556536 LRRFIP2Q9Y608 721 aaKnown RBP21.87■■□□□ 1.09
TUBB3-211ENST00000556536 FOXO4P98177 505 aa21.86■■□□□ 1.09
TUBB3-211ENST00000556536 BRIP1Q9BX63 1249 aa21.86■■□□□ 1.09
TUBB3-211ENST00000556536 PLA2G12BQ9BX93 195 aa21.86■■□□□ 1.09
TUBB3-211ENST00000556536 C10orf71Q711Q0 1435 aa21.86■■□□□ 1.09
TUBB3-211ENST00000556536 PDE8AO60658 829 aa21.85■■□□□ 1.09
TUBB3-211ENST00000556536 GNAI2P04899 355 aa21.85■■□□□ 1.09
TUBB3-211ENST00000556536 BICC1Q9H694 974 aaKnown RBP21.85■■□□□ 1.09
TUBB3-211ENST00000556536 RIC1Q4ADV7 1423 aa21.85■■□□□ 1.09
TUBB3-211ENST00000556536 ANKRD44Q8N8A2 993 aa21.84■■□□□ 1.09
TUBB3-211ENST00000556536 KLRG2A4D1S0 409 aaPredicted RBP21.83■■□□□ 1.09
TUBB3-211ENST00000556536 CTSWP56202 376 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms