RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 FKBP5Q13451 457 aaPredicted RBP21.86■■□□□ 1.09
PSEN1-217ENST00000556533 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
PSEN1-217ENST00000556533 ABCC12Q96J65 1359 aa21.86■■□□□ 1.09
PSEN1-217ENST00000556533 NUP98P52948 1817 aa21.85■■□□□ 1.09
PSEN1-217ENST00000556533 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-217ENST00000556533 MASTLQ96GX5 879 aa21.85■■□□□ 1.09
PSEN1-217ENST00000556533 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-217ENST00000556533 HCLS1P14317 486 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-217ENST00000556533 NPR1P16066 1061 aa21.84■■□□□ 1.09
PSEN1-217ENST00000556533 YY1P25490 414 aa21.84■■□□□ 1.09
PSEN1-217ENST00000556533 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
PSEN1-217ENST00000556533 TRMT2AQ8IZ69 625 aaKnown RBP21.84■■□□□ 1.09
PSEN1-217ENST00000556533 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-217ENST00000556533 KIAA1551Q9HCM1 1747 aa21.83■■□□□ 1.09
PSEN1-217ENST00000556533 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
PSEN1-217ENST00000556533 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
PSEN1-217ENST00000556533 FAM89AQ96GI7 184 aa21.83■■□□□ 1.09
PSEN1-217ENST00000556533 KLRG2A4D1S0 409 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-217ENST00000556533 NEXNQ0ZGT2 675 aa21.82■■□□□ 1.08
PSEN1-217ENST00000556533 TRIM28Q13263 835 aaKnown RBP21.82■■□□□ 1.08
PSEN1-217ENST00000556533 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
PSEN1-217ENST00000556533 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
PSEN1-217ENST00000556533 RPGRQ92834 1020 aaKnown RBP21.82■■□□□ 1.08
PSEN1-217ENST00000556533 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
PSEN1-217ENST00000556533 ADCY9O60503 1353 aa21.82■■□□□ 1.08
PSEN1-217ENST00000556533 JARID2Q92833 1246 aaPredicted RBP21.81■■□□□ 1.08
PSEN1-217ENST00000556533 CWC25Q9NXE8 425 aaPredicted RBP21.81■■□□□ 1.08
PSEN1-217ENST00000556533 C21orf2O43822 256 aa21.8■■□□□ 1.08
PSEN1-217ENST00000556533 BCL2L13Q9BXK5 485 aa21.8■■□□□ 1.08
PSEN1-217ENST00000556533 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
PSEN1-217ENST00000556533 F6X3S4 739 aa21.79■■□□□ 1.08
PSEN1-217ENST00000556533 PRPF40BQ6NWY9 871 aaKnown RBP21.79■■□□□ 1.08
PSEN1-217ENST00000556533 CCDC191Q8NCU4 936 aa21.79■■□□□ 1.08
PSEN1-217ENST00000556533 DNAAF4Q8WXU2 420 aa21.79■■□□□ 1.08
PSEN1-217ENST00000556533 SSH1Q8WYL5 1049 aa21.79■■□□□ 1.08
PSEN1-217ENST00000556533 GOLGB1Q14789 3259 aaKnown RBP21.79■■□□□ 1.08
PSEN1-217ENST00000556533 ANKRD31Q8N7Z5 1873 aa21.78■■□□□ 1.08
PSEN1-217ENST00000556533 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
PSEN1-217ENST00000556533 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
PSEN1-217ENST00000556533 MRPL50Q8N5N7 158 aaKnown RBP21.78■■□□□ 1.08
PSEN1-217ENST00000556533 RBM17Q96I25 401 aaKnown RBP21.78■■□□□ 1.08
PSEN1-217ENST00000556533 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-217ENST00000556533 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
PSEN1-217ENST00000556533 CRY2Q49AN0 593 aa21.77■■□□□ 1.08
PSEN1-217ENST00000556533 ZBTB38Q8NAP3 1195 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-217ENST00000556533 SMC4Q9NTJ3 1288 aa21.76■■□□□ 1.07
PSEN1-217ENST00000556533 NEURL1BA8MQ27 555 aa21.75■■□□□ 1.07
PSEN1-217ENST00000556533 SLC4A10Q6U841 1118 aa21.75■■□□□ 1.07
PSEN1-217ENST00000556533 PCCAP05165 728 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-217ENST00000556533 CT47B1P0C2W7 299 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-217ENST00000556533 HOXA10P31260 410 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-217ENST00000556533 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
PSEN1-217ENST00000556533 ARFGEF2Q9Y6D5 1785 aa21.74■■□□□ 1.07
PSEN1-217ENST00000556533 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
PSEN1-217ENST00000556533 RASSF7Q02833 373 aa21.73■■□□□ 1.07
PSEN1-217ENST00000556533 LINS1Q8NG48 757 aa21.73■■□□□ 1.07
PSEN1-217ENST00000556533 ZBED9Q6R2W3 1325 aa21.73■■□□□ 1.07
PSEN1-217ENST00000556533 COL11A2P13942 1736 aaPredicted RBP21.72■■□□□ 1.07
PSEN1-217ENST00000556533 ANKRD36CQ5JPF3 1778 aa21.72■■□□□ 1.07
PSEN1-217ENST00000556533 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
PSEN1-217ENST00000556533 OLFM4Q6UX06 510 aa21.72■■□□□ 1.07
PSEN1-217ENST00000556533 DDX46Q7L014 1031 aaKnown RBP21.72■■□□□ 1.07
PSEN1-217ENST00000556533 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
PSEN1-217ENST00000556533 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
PSEN1-217ENST00000556533 GCKRQ14397 625 aa21.71■■□□□ 1.07
PSEN1-217ENST00000556533 UTRNP46939 3433 aa21.71■■□□□ 1.07
PSEN1-217ENST00000556533 BEND3Q5T5X7 828 aa21.7■■□□□ 1.06
PSEN1-217ENST00000556533 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
PSEN1-217ENST00000556533 C9orf131Q5VYM1 1079 aa21.7■■□□□ 1.06
PSEN1-217ENST00000556533 UBE3BQ7Z3V4 1068 aa21.7■■□□□ 1.06
PSEN1-217ENST00000556533 C7orf43Q8WVR3 580 aa21.7■■□□□ 1.06
PSEN1-217ENST00000556533 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
PSEN1-217ENST00000556533 BRCA1P38398 1863 aaKnown RBP21.69■■□□□ 1.06
PSEN1-217ENST00000556533 PPEF1O14829 653 aaPredicted RBP21.69■■□□□ 1.06
PSEN1-217ENST00000556533 PDE8AO60658 829 aa21.69■■□□□ 1.06
PSEN1-217ENST00000556533 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
PSEN1-217ENST00000556533 RNF181Q9P0P0 153 aa21.69■■□□□ 1.06
PSEN1-217ENST00000556533 ABCC4O15439 1325 aa21.69■■□□□ 1.06
PSEN1-217ENST00000556533 H7C1W4 665 aa21.68■■□□□ 1.06
PSEN1-217ENST00000556533 NFKBIEO00221 500 aa21.68■■□□□ 1.06
PSEN1-217ENST00000556533 RARSP54136 660 aaKnown RBP21.68■■□□□ 1.06
PSEN1-217ENST00000556533 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
PSEN1-217ENST00000556533 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
PSEN1-217ENST00000556533 NOB1Q9ULX3 412 aaKnown RBP21.68■■□□□ 1.06
PSEN1-217ENST00000556533 PTPRCP08575 1304 aa21.68■■□□□ 1.06
PSEN1-217ENST00000556533 DLEC1Q9Y238 1755 aa21.68■■□□□ 1.06
PSEN1-217ENST00000556533 SRCIN1Q9C0H9 1055 aa21.67■■□□□ 1.06
PSEN1-217ENST00000556533 CDHR2Q9BYE9 1310 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 BBOX1O75936 387 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 LMNB1P20700 586 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 GRAPQ13588 217 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 SLC51AQ86UW1 340 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 GRAPLQ8TC17 118 aaPredicted RBP21.66■■□□□ 1.06
PSEN1-217ENST00000556533 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
PSEN1-217ENST00000556533 CCDC152Q4G0S7 254 aa21.65■■□□□ 1.06
PSEN1-217ENST00000556533 ZNF526Q8TF50 670 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-217ENST00000556533 C9orf78Q9NZ63 289 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-217ENST00000556533 ALDH1L1O75891 902 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms