RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
NRXN3-213ENST00000556496 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
NRXN3-213ENST00000556496 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
NRXN3-213ENST00000556496 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
NRXN3-213ENST00000556496 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 RUFY3Q7L099 469 aa12.72□□□□□ -0.37
NRXN3-213ENST00000556496 GPT2Q8TD30 523 aa12.72□□□□□ -0.37
NRXN3-213ENST00000556496 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
NRXN3-213ENST00000556496 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
NRXN3-213ENST00000556496 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
NRXN3-213ENST00000556496 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
NRXN3-213ENST00000556496 KCNJ4P48050 445 aa12.71□□□□□ -0.37
NRXN3-213ENST00000556496 TFCP2Q12800 502 aa12.71□□□□□ -0.37
NRXN3-213ENST00000556496 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.37
NRXN3-213ENST00000556496 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
NRXN3-213ENST00000556496 IL2RBP14784 551 aa12.71□□□□□ -0.38
NRXN3-213ENST00000556496 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.38
NRXN3-213ENST00000556496 NECTIN1Q15223 517 aa12.71□□□□□ -0.38
NRXN3-213ENST00000556496 STRN4Q9NRL3 753 aa12.71□□□□□ -0.38
NRXN3-213ENST00000556496 RBM8AQ9Y5S9 174 aaKnown RBP12.71□□□□□ -0.38
NRXN3-213ENST00000556496 ERBB4Q15303 1308 aa12.71□□□□□ -0.38
NRXN3-213ENST00000556496 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 ZNF445P59923 1031 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 TNNI3KQ59H18 835 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 DBNLQ9UJU6 430 aaKnown RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 FPGT-TNNI3KV9GXZ4 949 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 A1BGP04217 495 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 CASP7P55210 303 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 MAP4K1Q92918 833 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 KCNB2Q92953 911 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 CYP46A1Q9Y6A2 500 aa12.7□□□□□ -0.38
NRXN3-213ENST00000556496 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 COL5A2P05997 1499 aaPredicted RBP12.7□□□□□ -0.38
NRXN3-213ENST00000556496 COL15A1P39059 1388 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
NRXN3-213ENST00000556496 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
NRXN3-213ENST00000556496 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
NRXN3-213ENST00000556496 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
NRXN3-213ENST00000556496 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
NRXN3-213ENST00000556496 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
NRXN3-213ENST00000556496 ATP5JP18859 108 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
NRXN3-213ENST00000556496 EVA1CP58658 441 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 RRAGDQ9NQL2 400 aaPredicted RBP12.68□□□□□ -0.38
NRXN3-213ENST00000556496 SNRKQ9NRH2 765 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 H7C1W4 665 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 LARGE1O95461 756 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 CWC25Q9NXE8 425 aaPredicted RBP12.68□□□□□ -0.38
NRXN3-213ENST00000556496 GLI3P10071 1580 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
NRXN3-213ENST00000556496 MBD3O95983 291 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 SMC3Q9UQE7 1217 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
NRXN3-213ENST00000556496 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
NRXN3-213ENST00000556496 SLC27A2O14975 620 aa12.67□□□□□ -0.38
NRXN3-213ENST00000556496 FOXO4P98177 505 aa12.67□□□□□ -0.38
NRXN3-213ENST00000556496 ZNF589Q86UQ0 364 aaPredicted RBP12.67□□□□□ -0.38
NRXN3-213ENST00000556496 DBNDD2Q9BQY9 259 aa12.67□□□□□ -0.38
NRXN3-213ENST00000556496 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
NRXN3-213ENST00000556496 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
NRXN3-213ENST00000556496 GDPD2Q9HCC8 539 aa12.67□□□□□ -0.38
NRXN3-213ENST00000556496 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 SYT1P21579 422 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
NRXN3-213ENST00000556496 RNF20Q5VTR2 975 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 ZSCAN31Q96LW9 406 aaPredicted RBP12.66□□□□□ -0.38
NRXN3-213ENST00000556496 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
NRXN3-213ENST00000556496 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
NRXN3-213ENST00000556496 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 STX6O43752 255 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 PSMA5P28066 241 aa12.66□□□□□ -0.38
NRXN3-213ENST00000556496 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
NRXN3-213ENST00000556496 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 ANP32BQ92688 251 aaKnown RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 SYCE3A1L190 88 aa12.65□□□□□ -0.38
NRXN3-213ENST00000556496 LAMB4A4D0S4 1761 aa12.65□□□□□ -0.38
NRXN3-213ENST00000556496 DTNBO60941 627 aa12.65□□□□□ -0.38
NRXN3-213ENST00000556496 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 ME3Q16798 604 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms