RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BRD7Q9NPI1 651 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 SLAIN2Q9P270 581 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
SRP54-211ENST00000556445 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
SRP54-211ENST00000556445 TGFBR3LH3BV60 316 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 EPXP11678 715 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 ADH6P28332 368 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 HIF1AQ16665 826 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 FCHSD1Q86WN1 690 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 NEDD1Q8NHV4 660 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 MYO19Q96H55 970 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 KLK14Q9P0G3 267 aa8.12□□□□□ -1.11
SRP54-211ENST00000556445 WIZO95785 1651 aa8.11□□□□□ -1.11
SRP54-211ENST00000556445 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
SRP54-211ENST00000556445 PCBP4P57723 403 aaKnown RBP8.11□□□□□ -1.11
SRP54-211ENST00000556445 CLP1Q92989 425 aaKnown RBP8.11□□□□□ -1.11
SRP54-211ENST00000556445 VTI1AQ96AJ9 217 aa8.11□□□□□ -1.11
SRP54-211ENST00000556445 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
SRP54-211ENST00000556445 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
SRP54-211ENST00000556445 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
SRP54-211ENST00000556445 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
SRP54-211ENST00000556445 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
SRP54-211ENST00000556445 DGKZQ13574 1117 aa8.1□□□□□ -1.11
SRP54-211ENST00000556445 SCARF2Q96GP6 870 aaPredicted RBP8.1□□□□□ -1.11
SRP54-211ENST00000556445 MDFIQ99750 246 aa8.1□□□□□ -1.11
SRP54-211ENST00000556445 LRFN2Q9ULH4 789 aa8.1□□□□□ -1.11
SRP54-211ENST00000556445 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
SRP54-211ENST00000556445 TOP2AP11388 1531 aaKnown RBP8.09□□□□□ -1.11
SRP54-211ENST00000556445 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
SRP54-211ENST00000556445 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
SRP54-211ENST00000556445 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
SRP54-211ENST00000556445 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
SRP54-211ENST00000556445 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
SRP54-211ENST00000556445 PPP1R15AO75807 674 aaPredicted RBP8.08□□□□□ -1.12
SRP54-211ENST00000556445 IRS1P35568 1242 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 RASSF7Q02833 373 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 COX20Q5RI15 118 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 COL26A1Q96A83 441 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 PEG3Q9GZU2 1588 aa8.08□□□□□ -1.12
SRP54-211ENST00000556445 SIN3BO75182 1162 aa8.07□□□□□ -1.12
SRP54-211ENST00000556445 INPP5BP32019 993 aa8.07□□□□□ -1.12
SRP54-211ENST00000556445 C11orf91Q3C1V1 193 aa8.07□□□□□ -1.12
SRP54-211ENST00000556445 RAB44Q7Z6P3 723 aaPredicted RBP8.07□□□□□ -1.12
SRP54-211ENST00000556445 SAP130Q9H0E3 1048 aa8.07□□□□□ -1.12
SRP54-211ENST00000556445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.07□□□□□ -1.12
SRP54-211ENST00000556445 IDH3AP50213 366 aa8.06□□□□□ -1.12
SRP54-211ENST00000556445 BEND7Q8N7W2 519 aaPredicted RBP8.06□□□□□ -1.12
SRP54-211ENST00000556445 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 ADARB2-AS1A8MUL3 147 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 MICAL2O94851 1124 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 KANK3Q6NY19 840 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 LINC00114Q6XXX2 140 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 CHSY3Q70JA7 882 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 MKNK1Q9BUB5 465 aa8.05□□□□□ -1.12
SRP54-211ENST00000556445 ELOA3CA0A087WX78 387 aaPredicted RBP8.04□□□□□ -1.12
SRP54-211ENST00000556445 ELOA3DA6NLF2 546 aaPredicted RBP8.04□□□□□ -1.12
SRP54-211ENST00000556445 PHF20L1A8MW92 1017 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 GDF11O95390 407 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 AMPD1P23109 780 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 DGKGP49619 791 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 ELOA3BQ3SY89 546 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 PODNQ7Z5L7 613 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 TMEM151AQ8N4L1 468 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 ELOA3Q8NG57 546 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 GSX2Q9BZM3 304 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 RRAGCQ9HB90 399 aa8.04□□□□□ -1.12
SRP54-211ENST00000556445 TNFRSF10BO14763 440 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 OPLAHO14841 1288 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 ARSDP51689 593 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 FAM26DQ5JW98 314 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 BHMTQ93088 406 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 MKL2Q9ULH7 1088 aa8.03□□□□□ -1.12
SRP54-211ENST00000556445 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
SRP54-211ENST00000556445 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
SRP54-211ENST00000556445 PTCD1O75127 700 aaKnown RBP8.02□□□□□ -1.13
SRP54-211ENST00000556445 NEUROD1Q13562 356 aa8.02□□□□□ -1.13
SRP54-211ENST00000556445 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
SRP54-211ENST00000556445 ETFBKMTQ8IXQ9 262 aa8.02□□□□□ -1.13
SRP54-211ENST00000556445 EPB42P16452 691 aa8.01□□□□□ -1.13
SRP54-211ENST00000556445 CCINQ13939 588 aa8.01□□□□□ -1.13
SRP54-211ENST00000556445 NAA30Q147X3 362 aaPredicted RBP8.01□□□□□ -1.13
SRP54-211ENST00000556445 ARID3AQ99856 593 aa8.01□□□□□ -1.13
SRP54-211ENST00000556445 EFCC1Q9HA90 598 aa8.01□□□□□ -1.13
SRP54-211ENST00000556445 STARD13Q9Y3M8 1113 aa8.01□□□□□ -1.13
SRP54-211ENST00000556445 ADH7P40394 386 aa8□□□□□ -1.13
SRP54-211ENST00000556445 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
SRP54-211ENST00000556445 SEPT3Q9UH03 358 aa8□□□□□ -1.13
SRP54-211ENST00000556445 USP20Q9Y2K6 914 aa8□□□□□ -1.13
SRP54-211ENST00000556445 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
SRP54-211ENST00000556445 NFKB1P19838 968 aa7.99□□□□□ -1.13
SRP54-211ENST00000556445 ALAS2P22557 587 aa7.99□□□□□ -1.13
SRP54-211ENST00000556445 BRD2P25440 801 aaKnown RBP7.99□□□□□ -1.13
SRP54-211ENST00000556445 COL8A1P27658 744 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms