RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TOP2BQ02880 1626 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 CUX1P39880 1505 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-241ENST00000556374 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 SPDYE3A6NKU9 549 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-241ENST00000556374 PRKCSHP14314 528 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ALAS2P22557 587 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 ADAMTS19Q8TE59 1207 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 MDFIQ99750 246 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 NEUROD4Q9HD90 331 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 PRDM6Q9NQX0 595 aa6.73□□□□□ -1.33
ATXN3-241ENST00000556374 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
ATXN3-241ENST00000556374 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-241ENST00000556374 COL8A1P27658 744 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 TXLNAP40222 546 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 CLDN10P78369 228 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 FCHSD1Q86WN1 690 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 FAM9AQ8IZU1 332 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-241ENST00000556374 FNBP4Q8N3X1 1017 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-241ENST00000556374 OGFOD1Q8N543 542 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 UCN2Q96RP3 112 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
ATXN3-241ENST00000556374 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 SPATA31D1Q6ZQQ2 1576 aa6.72□□□□□ -1.33
ATXN3-241ENST00000556374 CD33P20138 364 aa6.71□□□□□ -1.34
ATXN3-241ENST00000556374 C11orf16Q9NQ32 467 aa6.71□□□□□ -1.34
ATXN3-241ENST00000556374 HCN2Q9UL51 889 aa6.71□□□□□ -1.34
ATXN3-241ENST00000556374 ZNF232Q9UNY5 417 aa6.71□□□□□ -1.34
ATXN3-241ENST00000556374 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
ATXN3-241ENST00000556374 A6NJR5 290 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 DKK1O94907 266 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 TNS4Q8IZW8 715 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 DEPDC4Q8N2C3 294 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 RHPN1Q8TCX5 695 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 ABCA10Q8WWZ4 1543 aa6.7□□□□□ -1.34
ATXN3-241ENST00000556374 SPATA31C1P0DKV0 1188 aa6.69□□□□□ -1.34
ATXN3-241ENST00000556374 ILDR2Q71H61 639 aa6.69□□□□□ -1.34
ATXN3-241ENST00000556374 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-241ENST00000556374 EEA1Q15075 1411 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 PRG4Q92954 1404 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-241ENST00000556374 BAG6P46379 1132 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 SEC13P55735 322 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 IER5Q5VY09 327 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 LRRC69Q6ZNQ3 347 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 SYT9Q86SS6 491 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 Q8N3U1 123 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 TSPAN10Q9H1Z9 355 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-241ENST00000556374 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
ATXN3-241ENST00000556374 GLI2P10070 1586 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 FURINP09958 794 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 GRIN2CQ14957 1233 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 C2orf49Q9BVC5 232 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-241ENST00000556374 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 SUV39H2Q9H5I1 410 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 STRN4Q9NRL3 753 aa6.67□□□□□ -1.34
ATXN3-241ENST00000556374 MAFBQ9Y5Q3 323 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-241ENST00000556374 KIF21BO75037 1637 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 MAP3K4Q9Y6R4 1608 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 PCBP4P57723 403 aaKnown RBP6.66□□□□□ -1.34
ATXN3-241ENST00000556374 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
ATXN3-241ENST00000556374 GLMNQ92990 594 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 PHACTR1Q9C0D0 580 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 BRD7Q9NPI1 651 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 ATAD2Q6PL18 1390 aa6.66□□□□□ -1.34
ATXN3-241ENST00000556374 FAM196BA6NMK8 535 aa6.65□□□□□ -1.34
ATXN3-241ENST00000556374 RASA1P20936 1047 aa6.65□□□□□ -1.34
ATXN3-241ENST00000556374 SUSD3Q96L08 255 aa6.65□□□□□ -1.34
ATXN3-241ENST00000556374 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.34
ATXN3-241ENST00000556374 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
ATXN3-241ENST00000556374 KCNH4Q9UQ05 1017 aa6.65□□□□□ -1.34
ATXN3-241ENST00000556374 CUL7Q14999 1698 aa6.65□□□□□ -1.35
ATXN3-241ENST00000556374 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 C21orf2O43822 256 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 PPP1R12BO60237 982 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-241ENST00000556374 IGFBP4P22692 258 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 TYRO3Q06418 890 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 SPEM2Q0P670 501 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 PRRT3Q5FWE3 981 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 ALDH16A1Q8IZ83 802 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 PLVAPQ9BX97 442 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 FHAD1B1AJZ9 1412 aa6.64□□□□□ -1.35
ATXN3-241ENST00000556374 COL17A1Q9UMD9 1497 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-241ENST00000556374 PCF11O94913 1555 aaKnown RBP6.64□□□□□ -1.35
ATXN3-241ENST00000556374 SFSWAPQ12872 951 aaKnown RBP6.63□□□□□ -1.35
ATXN3-241ENST00000556374 PTK7Q13308 1070 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 PCSK7Q16549 785 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 RTN1Q16799 776 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 CD163Q86VB7 1156 aa6.63□□□□□ -1.35
ATXN3-241ENST00000556374 TSEN2Q8NCE0 465 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms