RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-236ENST00000556220 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
ATXN3-236ENST00000556220 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
ATXN3-236ENST00000556220 FLAD1Q8NFF5 587 aa9.88□□□□□ -0.83
ATXN3-236ENST00000556220 WNK3Q9BYP7 1800 aa9.88□□□□□ -0.83
ATXN3-236ENST00000556220 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 BTAF1O14981 1849 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 TNFRSF10AO00220 468 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 CLCN1P35523 988 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 JMYQ8N9B5 988 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
ATXN3-236ENST00000556220 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
ATXN3-236ENST00000556220 TNS4Q8IZW8 715 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 KLRG1Q96E93 195 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 WWC3Q9ULE0 1092 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 PIK3C2AO00443 1686 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 NFAT5O94916 1531 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 ANKRD36BQ8N2N9 1353 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 RAB3GAP2Q9H2M9 1393 aa9.86□□□□□ -0.83
ATXN3-236ENST00000556220 IGSF1Q8N6C5 1336 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 ZNF787Q6DD87 383 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 NSD2O96028 1365 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
ATXN3-236ENST00000556220 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
ATXN3-236ENST00000556220 ZBTB24O43167 697 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-236ENST00000556220 MMP16P51512 607 aa9.84□□□□□ -0.83
ATXN3-236ENST00000556220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATXN3-236ENST00000556220 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
ATXN3-236ENST00000556220 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
ATXN3-236ENST00000556220 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
ATXN3-236ENST00000556220 FAM187AA6NFU0 413 aa9.83□□□□□ -0.84
ATXN3-236ENST00000556220 HTRA3P83110 453 aa9.83□□□□□ -0.84
ATXN3-236ENST00000556220 FOXC1Q12948 553 aa9.83□□□□□ -0.84
ATXN3-236ENST00000556220 ZCRB1Q8TBF4 217 aaKnown RBP9.83□□□□□ -0.84
ATXN3-236ENST00000556220 IP6K1Q92551 441 aa9.83□□□□□ -0.84
ATXN3-236ENST00000556220 FAM217BQ9NTX9 383 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-236ENST00000556220 USP47Q96K76 1375 aa9.83□□□□□ -0.84
ATXN3-236ENST00000556220 HOXA2O43364 376 aa9.82□□□□□ -0.84
ATXN3-236ENST00000556220 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
ATXN3-236ENST00000556220 NME9Q86XW9 330 aa9.82□□□□□ -0.84
ATXN3-236ENST00000556220 NMRK2Q9NPI5 230 aa9.82□□□□□ -0.84
ATXN3-236ENST00000556220 FSTL1Q12841 308 aa9.81□□□□□ -0.84
ATXN3-236ENST00000556220 LTV1Q96GA3 475 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-236ENST00000556220 C16orf71Q8IYS4 520 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-236ENST00000556220 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 DXOO77932 396 aaKnown RBP9.79□□□□□ -0.84
ATXN3-236ENST00000556220 AMIGO3Q86WK7 504 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 AK7Q96M32 723 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 TOR4AQ9NXH8 423 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 KIAA1210Q9ULL0 1709 aa9.79□□□□□ -0.84
ATXN3-236ENST00000556220 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 TGFB2P61812 414 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 BCS1LQ9Y276 419 aa9.78□□□□□ -0.84
ATXN3-236ENST00000556220 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
ATXN3-236ENST00000556220 ZMYND10O75800 440 aa9.77□□□□□ -0.85
ATXN3-236ENST00000556220 SSFA2P28290 1259 aa9.77□□□□□ -0.85
ATXN3-236ENST00000556220 HLA-CQ95604 372 aa9.77□□□□□ -0.85
ATXN3-236ENST00000556220 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.85
ATXN3-236ENST00000556220 PALLDQ8WX93 1383 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 LY75O60449 1722 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 A0A0G2JLW4 131 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 HOXC9P31274 260 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 MPRIPQ6WCQ1 1025 aa9.76□□□□□ -0.85
ATXN3-236ENST00000556220 HDGFL2Q7Z4V5 671 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-236ENST00000556220 SMARCC1Q92922 1105 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-236ENST00000556220 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
ATXN3-236ENST00000556220 WNT7AO00755 349 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 AVPP01185 164 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 HSPA1AP0DMV8 641 aaKnown RBP9.75□□□□□ -0.85
ATXN3-236ENST00000556220 HSPA1BP0DMV9 641 aaKnown RBP9.75□□□□□ -0.85
ATXN3-236ENST00000556220 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-236ENST00000556220 AMPHP49418 695 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 TRIM32Q13049 653 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 CRIPAKQ8N1N5 446 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
ATXN3-236ENST00000556220 MMP10P09238 476 aa9.74□□□□□ -0.85
ATXN3-236ENST00000556220 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
ATXN3-236ENST00000556220 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
ATXN3-236ENST00000556220 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
ATXN3-236ENST00000556220 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
ATXN3-236ENST00000556220 MAP3K19Q56UN5 1328 aa9.74□□□□□ -0.85
ATXN3-236ENST00000556220 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 MEGF6O75095 1541 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 DPEP1P16444 411 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 TATP17735 454 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-236ENST00000556220 FBLN1P23142 703 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 AMHR2Q16671 573 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 SMC1BQ8NDV3 1235 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 RAPGEF4Q8WZA2 1011 aa9.73□□□□□ -0.85
ATXN3-236ENST00000556220 PIGBQ92521 554 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms