RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
CHGA-205ENST00000556098 IARSP41252 1262 aaKnown RBP14.38□□□□□ -0.11
CHGA-205ENST00000556098 CCDC27Q2M243 656 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 SYNE4Q8N205 404 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 WBP1LQ9NX94 342 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 ZNF521Q96K83 1311 aa14.38□□□□□ -0.11
CHGA-205ENST00000556098 FMR1Q06787 632 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHGA-205ENST00000556098 TPTE2Q6XPS3 522 aa14.37□□□□□ -0.11
CHGA-205ENST00000556098 PNMA8AQ86V59 439 aaPredicted RBP14.37□□□□□ -0.11
CHGA-205ENST00000556098 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
CHGA-205ENST00000556098 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
CHGA-205ENST00000556098 LAMB2P55268 1798 aa14.37□□□□□ -0.11
CHGA-205ENST00000556098 TAF1P21675 1872 aa14.36□□□□□ -0.11
CHGA-205ENST00000556098 EIF6P56537 245 aaKnown RBP14.36□□□□□ -0.11
CHGA-205ENST00000556098 RTKN2Q8IZC4 609 aa14.36□□□□□ -0.11
CHGA-205ENST00000556098 NEFMP07197 916 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 MAP2K1Q02750 393 aaPredicted RBP14.35□□□□□ -0.11
CHGA-205ENST00000556098 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 MCM10Q7L590 875 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 C7orf43Q8WVR3 580 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
CHGA-205ENST00000556098 COL4A5P29400 1685 aa14.35□□□□□ -0.11
CHGA-205ENST00000556098 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 POLR2AP24928 1970 aaKnown RBP14.34□□□□□ -0.11
CHGA-205ENST00000556098 RASSF10A6NK89 507 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 NUTM1Q86Y26 1132 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 GPC2Q8N158 579 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
CHGA-205ENST00000556098 U2AF1L5P0DN76 240 aaPredicted RBP14.33□□□□□ -0.12
CHGA-205ENST00000556098 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 U2AF1Q01081 240 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHGA-205ENST00000556098 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 HLFQ16534 295 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 LARGE2Q8N3Y3 721 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
CHGA-205ENST00000556098 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHGA-205ENST00000556098 MAPK8IP3Q9UPT6 1336 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 AKAP11Q9UKA4 1901 aa14.33□□□□□ -0.12
CHGA-205ENST00000556098 ANKRD36CQ5JPF3 1778 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 E9PSI1 815 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 TRAF5O00463 557 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
CHGA-205ENST00000556098 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 ZNF408Q9H9D4 720 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 ABCC12Q96J65 1359 aa14.32□□□□□ -0.12
CHGA-205ENST00000556098 FZD9O00144 591 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 APAF1O14727 1248 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 AOC2O75106 756 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 GPTP24298 496 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 EPS15P42566 896 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 ECE1P42892 770 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 MLLT1Q03111 559 aaPredicted RBP14.31□□□□□ -0.12
CHGA-205ENST00000556098 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 CEMIPQ8WUJ3 1361 aa14.31□□□□□ -0.12
CHGA-205ENST00000556098 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
CHGA-205ENST00000556098 SLC34A2O95436 690 aa14.3□□□□□ -0.12
CHGA-205ENST00000556098 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
CHGA-205ENST00000556098 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
CHGA-205ENST00000556098 GPR101Q96P66 508 aaPredicted RBP14.3□□□□□ -0.12
CHGA-205ENST00000556098 MIS18AQ9NYP9 233 aa14.3□□□□□ -0.12
CHGA-205ENST00000556098 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
CHGA-205ENST00000556098 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
CHGA-205ENST00000556098 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
CHGA-205ENST00000556098 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
CHGA-205ENST00000556098 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
CHGA-205ENST00000556098 MYL6BP14649 208 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 IL16Q14005 1332 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 CCDC146Q8IYE0 955 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
CHGA-205ENST00000556098 PLEKHF1Q96S99 279 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
CHGA-205ENST00000556098 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
CHGA-205ENST00000556098 PPIP5K2O43314 1243 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 SCNN1DP51172 638 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 SLFN5Q08AF3 891 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 WWC1Q8IX03 1113 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 PSMD1Q99460 953 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 RCAN3Q9UKA8 241 aa14.27□□□□□ -0.13
CHGA-205ENST00000556098 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
CHGA-205ENST00000556098 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
CHGA-205ENST00000556098 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
CHGA-205ENST00000556098 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
CHGA-205ENST00000556098 AOC3Q16853 763 aa14.26□□□□□ -0.13
CHGA-205ENST00000556098 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
CHGA-205ENST00000556098 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
CHGA-205ENST00000556098 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
CHGA-205ENST00000556098 CST9Q5W186 159 aa14.25□□□□□ -0.13
CHGA-205ENST00000556098 USP50Q70EL3 339 aaPredicted RBP14.25□□□□□ -0.13
CHGA-205ENST00000556098 DGKZQ13574 1117 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 TTLL7Q6ZT98 887 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms