RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
TMEM55B-206ENST00000556093 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
TMEM55B-206ENST00000556093 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
TMEM55B-206ENST00000556093 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
TMEM55B-206ENST00000556093 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 RASSF7Q02833 373 aa16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 GOLGA2Q08379 1002 aa16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 C9orf131Q5VYM1 1079 aa16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 NLRP10Q86W26 655 aa16.68■□□□□ 0.26
TMEM55B-206ENST00000556093 NFKBIEO00221 500 aa16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 C21orf2O43822 256 aa16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
TMEM55B-206ENST00000556093 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 GPBP1L1Q9HC44 474 aaPredicted RBP16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
TMEM55B-206ENST00000556093 LMNB1P20700 586 aa16.65■□□□□ 0.26
TMEM55B-206ENST00000556093 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
TMEM55B-206ENST00000556093 RPGRQ92834 1020 aaKnown RBP16.65■□□□□ 0.26
TMEM55B-206ENST00000556093 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
TMEM55B-206ENST00000556093 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
TMEM55B-206ENST00000556093 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 SLC10A5Q5PT55 438 aa16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 C7orf43Q8WVR3 580 aa16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
TMEM55B-206ENST00000556093 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
TMEM55B-206ENST00000556093 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
TMEM55B-206ENST00000556093 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
TMEM55B-206ENST00000556093 NLRP3Q96P20 1036 aa16.63■□□□□ 0.25
TMEM55B-206ENST00000556093 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
TMEM55B-206ENST00000556093 PRELPP51888 382 aa16.62■□□□□ 0.25
TMEM55B-206ENST00000556093 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-206ENST00000556093 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
TMEM55B-206ENST00000556093 SNED1Q8TER0 1413 aa16.62■□□□□ 0.25
TMEM55B-206ENST00000556093 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
TMEM55B-206ENST00000556093 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 VAMP4O75379 141 aa16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 MYD88Q99836 296 aa16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
TMEM55B-206ENST00000556093 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 RTKN2Q8IZC4 609 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 FAM89AQ96GI7 184 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 ABCC4O15439 1325 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 TAF1P21675 1872 aa16.59■□□□□ 0.25
TMEM55B-206ENST00000556093 MYH3P11055 1940 aa16.58■□□□□ 0.25
TMEM55B-206ENST00000556093 PI4KAP2A4QPH2 592 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 FLIIQ13045 1269 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 CC2D2BQ6DHV5 1058 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 G2E3Q7L622 706 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 PI4KAP1Q8N8J0 262 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 ZNF428Q96B54 188 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
TMEM55B-206ENST00000556093 E9PSI1 815 aa16.57■□□□□ 0.24
TMEM55B-206ENST00000556093 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
TMEM55B-206ENST00000556093 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
TMEM55B-206ENST00000556093 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
TMEM55B-206ENST00000556093 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
TMEM55B-206ENST00000556093 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
TMEM55B-206ENST00000556093 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
TMEM55B-206ENST00000556093 PSMD1Q99460 953 aa16.56■□□□□ 0.24
TMEM55B-206ENST00000556093 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 KIF3CO14782 793 aa16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 NMRK2Q9NPI5 230 aa16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
TMEM55B-206ENST00000556093 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 GRAPQ13588 217 aa16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
TMEM55B-206ENST00000556093 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 BBOX1O75936 387 aa16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
TMEM55B-206ENST00000556093 DNAAF4Q8WXU2 420 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms