RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 PNMA8AQ86V59 439 aaPredicted RBP8.21□□□□□ -1.1
NEK9-207ENST00000555763 LTV1Q96GA3 475 aaPredicted RBP8.21□□□□□ -1.1
NEK9-207ENST00000555763 HHIPL1Q96JK4 782 aa8.21□□□□□ -1.1
NEK9-207ENST00000555763 HACL1Q9UJ83 578 aa8.21□□□□□ -1.1
NEK9-207ENST00000555763 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 SEC24BO95487 1268 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 RBM26Q5T8P6 1007 aaKnown RBP8.2□□□□□ -1.1
NEK9-207ENST00000555763 CST9Q5W186 159 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 CTU1Q7Z7A3 348 aaKnown RBP8.2□□□□□ -1.1
NEK9-207ENST00000555763 NPM2Q86SE8 214 aaKnown RBP8.2□□□□□ -1.1
NEK9-207ENST00000555763 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
NEK9-207ENST00000555763 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 TAOK3Q9H2K8 898 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 SAGE1Q9NXZ1 904 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 EYSQ5T1H1 3165 aa8.2□□□□□ -1.1
NEK9-207ENST00000555763 TM4SF1P30408 202 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 SAPCD2Q86UD0 394 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 NME9Q86XW9 330 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 KIF12Q96FN5 646 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 SLC4A9Q96Q91 983 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 SRP68Q9UHB9 627 aaKnown RBP8.19□□□□□ -1.1
NEK9-207ENST00000555763 ASAP1Q9ULH1 1129 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 RNF123Q5XPI4 1314 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 LAMA2P24043 3122 aaKnown RBP8.19□□□□□ -1.1
NEK9-207ENST00000555763 RTL1A6NKG5 1358 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 CACNA1AO00555 2505 aa8.19□□□□□ -1.1
NEK9-207ENST00000555763 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 TRIM66O15016 1216 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 PDE4DQ08499 809 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
NEK9-207ENST00000555763 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 NCAPD2Q15021 1401 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 PRUNE2Q8WUY3 3088 aa8.18□□□□□ -1.1
NEK9-207ENST00000555763 KIF20BQ96Q89 1820 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 PDE4AP27815 886 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 HOXC9P31274 260 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 NBPF6Q5VWK0 638 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 RAPGEF4Q8WZA2 1011 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 NBPF4Q96M43 638 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 ZIC5Q96T25 663 aa8.17□□□□□ -1.1
NEK9-207ENST00000555763 EDC4Q6P2E9 1401 aaKnown RBP8.17□□□□□ -1.1
NEK9-207ENST00000555763 C21orf2O43822 256 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 LAMB1P07942 1786 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 TATP17735 454 aaPredicted RBP8.16□□□□□ -1.1
NEK9-207ENST00000555763 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
NEK9-207ENST00000555763 NOGQ13253 232 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 C2CD5Q86YS7 1000 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.16□□□□□ -1.1
NEK9-207ENST00000555763 DDX27Q96GQ7 796 aaKnown RBP8.16□□□□□ -1.1
NEK9-207ENST00000555763 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
NEK9-207ENST00000555763 EVC2Q86UK5 1308 aa8.15□□□□□ -1.1
NEK9-207ENST00000555763 TRAF5O00463 557 aa8.15□□□□□ -1.1
NEK9-207ENST00000555763 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
NEK9-207ENST00000555763 TMOD3Q9NYL9 352 aa8.15□□□□□ -1.1
NEK9-207ENST00000555763 COL4A5P29400 1685 aa8.14□□□□□ -1.11
NEK9-207ENST00000555763 H0YIN7 160 aa8.14□□□□□ -1.11
NEK9-207ENST00000555763 MAP3K13O43283 966 aa8.14□□□□□ -1.11
NEK9-207ENST00000555763 PKN2Q16513 984 aaKnown RBP8.14□□□□□ -1.11
NEK9-207ENST00000555763 MPNDQ8N594 471 aa8.14□□□□□ -1.11
NEK9-207ENST00000555763 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
NEK9-207ENST00000555763 KDM3BQ7LBC6 1761 aa8.13□□□□□ -1.11
NEK9-207ENST00000555763 TTLL13PA6NNM8 815 aa8.13□□□□□ -1.11
NEK9-207ENST00000555763 NFIXQ14938 502 aa8.13□□□□□ -1.11
NEK9-207ENST00000555763 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
NEK9-207ENST00000555763 NCOR1O75376 2440 aa8.13□□□□□ -1.11
NEK9-207ENST00000555763 GPC2Q8N158 579 aa8.12□□□□□ -1.11
NEK9-207ENST00000555763 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
NEK9-207ENST00000555763 RNF186Q9NXI6 227 aa8.12□□□□□ -1.11
NEK9-207ENST00000555763 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
NEK9-207ENST00000555763 A0A1W2PP64 1363 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 FAM155AB1AL88 458 aaPredicted RBP8.11□□□□□ -1.11
NEK9-207ENST00000555763 FZD9O00144 591 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 APBB1O00213 710 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 CELF2O95319 508 aaKnown RBP8.11□□□□□ -1.11
NEK9-207ENST00000555763 TIE1P35590 1138 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 CRKLP46109 303 aaKnown RBP8.11□□□□□ -1.11
NEK9-207ENST00000555763 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 PIEZO1Q92508 2521 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 SNED1Q8TER0 1413 aa8.11□□□□□ -1.11
NEK9-207ENST00000555763 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
NEK9-207ENST00000555763 TRPA1O75762 1119 aa8.1□□□□□ -1.11
NEK9-207ENST00000555763 SERPINB2P05120 415 aa8.1□□□□□ -1.11
NEK9-207ENST00000555763 SCNN1DP51172 638 aa8.1□□□□□ -1.11
NEK9-207ENST00000555763 SOGA3Q5TF21 947 aa8.1□□□□□ -1.11
NEK9-207ENST00000555763 FBXO46Q6PJ61 603 aaPredicted RBP8.1□□□□□ -1.11
NEK9-207ENST00000555763 IFNL1Q8IU54 200 aa8.1□□□□□ -1.11
NEK9-207ENST00000555763 AMPHP49418 695 aa8.09□□□□□ -1.11
NEK9-207ENST00000555763 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
NEK9-207ENST00000555763 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
NEK9-207ENST00000555763 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
NEK9-207ENST00000555763 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.11
NEK9-207ENST00000555763 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.11
NEK9-207ENST00000555763 SOS1Q07889 1333 aaPredicted RBP8.08□□□□□ -1.12
NEK9-207ENST00000555763 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
NEK9-207ENST00000555763 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms