RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 LGR6Q9HBX8 967 aa12.53□□□□□ -0.4
PRKCH-218ENST00000555628 C21orf2O43822 256 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-218ENST00000555628 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
PRKCH-218ENST00000555628 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
PRKCH-218ENST00000555628 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
PRKCH-218ENST00000555628 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
PRKCH-218ENST00000555628 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-218ENST00000555628 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
PRKCH-218ENST00000555628 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
PRKCH-218ENST00000555628 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
PRKCH-218ENST00000555628 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
PRKCH-218ENST00000555628 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
PRKCH-218ENST00000555628 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
PRKCH-218ENST00000555628 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-218ENST00000555628 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
PRKCH-218ENST00000555628 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
PRKCH-218ENST00000555628 LBX1P52954 281 aa12.49□□□□□ -0.41
PRKCH-218ENST00000555628 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
PRKCH-218ENST00000555628 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
PRKCH-218ENST00000555628 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-218ENST00000555628 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-218ENST00000555628 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 SRGNP10124 158 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 PDE6BP35913 854 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 RGS19P49795 217 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 STYK1Q6J9G0 422 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
PRKCH-218ENST00000555628 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 COL4A5P29400 1685 aa12.48□□□□□ -0.41
PRKCH-218ENST00000555628 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
PRKCH-218ENST00000555628 DSG2Q14126 1118 aa12.47□□□□□ -0.41
PRKCH-218ENST00000555628 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
PRKCH-218ENST00000555628 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
PRKCH-218ENST00000555628 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
PRKCH-218ENST00000555628 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
PRKCH-218ENST00000555628 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
PRKCH-218ENST00000555628 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRKCH-218ENST00000555628 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
PRKCH-218ENST00000555628 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
PRKCH-218ENST00000555628 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
PRKCH-218ENST00000555628 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRKCH-218ENST00000555628 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
PRKCH-218ENST00000555628 CRISPLD2Q9H0B8 497 aa12.45□□□□□ -0.42
PRKCH-218ENST00000555628 PANK3Q9H999 370 aa12.45□□□□□ -0.42
PRKCH-218ENST00000555628 A0A087WZG4 1122 aa12.44□□□□□ -0.42
PRKCH-218ENST00000555628 FOXK1P85037 733 aa12.44□□□□□ -0.42
PRKCH-218ENST00000555628 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
PRKCH-218ENST00000555628 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
PRKCH-218ENST00000555628 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
PRKCH-218ENST00000555628 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
PRKCH-218ENST00000555628 ZNF496Q96IT1 587 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-218ENST00000555628 COL3A1P02461 1466 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-218ENST00000555628 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
PRKCH-218ENST00000555628 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 HOXB1P14653 301 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-218ENST00000555628 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-218ENST00000555628 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
PRKCH-218ENST00000555628 FZD9O00144 591 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 STARD3NLO95772 234 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 EPHX2P34913 555 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
PRKCH-218ENST00000555628 PDE4AP27815 886 aa12.41□□□□□ -0.42
PRKCH-218ENST00000555628 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-218ENST00000555628 FKBP4Q02790 459 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRKCH-218ENST00000555628 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
PRKCH-218ENST00000555628 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-218ENST00000555628 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
PRKCH-218ENST00000555628 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
PRKCH-218ENST00000555628 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
PRKCH-218ENST00000555628 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
PRKCH-218ENST00000555628 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
PRKCH-218ENST00000555628 HMOX1P09601 288 aa12.4□□□□□ -0.42
PRKCH-218ENST00000555628 EMP3P54852 163 aa12.4□□□□□ -0.42
PRKCH-218ENST00000555628 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
PRKCH-218ENST00000555628 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
PRKCH-218ENST00000555628 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
PRKCH-218ENST00000555628 RIMBP2O15034 1052 aa12.39□□□□□ -0.43
PRKCH-218ENST00000555628 A1BGP04217 495 aa12.39□□□□□ -0.43
PRKCH-218ENST00000555628 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-218ENST00000555628 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKCH-218ENST00000555628 EAPPQ56P03 285 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms