RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 HLFQ16534 295 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 SIRT2Q8IXJ6 389 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 AK7Q96M32 723 aa12.06□□□□□ -0.48
HNRNPC-220ENST00000555585 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 CCDC191Q8NCU4 936 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 JARID2Q92833 1246 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 RTCBQ9Y3I0 505 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 UTYO14607 1347 aa12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-220ENST00000555585 TNS1Q9HBL0 1735 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 GPTP24298 496 aa12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
HNRNPC-220ENST00000555585 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 PLSCR1O15162 318 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
HNRNPC-220ENST00000555585 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 H7C1W4 665 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 PHF14O94880 888 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 NLRP10Q86W26 655 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 SKAP1Q86WV1 359 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 BICC1Q9H694 974 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 DCTPP1Q9H773 170 aa12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-220ENST00000555585 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 ZPR1O75312 459 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 RGS3P49796 1198 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 SSH3Q8TE77 659 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
HNRNPC-220ENST00000555585 SCN7AQ01118 1682 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 FAM177BA6PVY3 158 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 APBB1O00213 710 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
HNRNPC-220ENST00000555585 RFC4P35249 363 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 CASP7P55210 303 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
HNRNPC-220ENST00000555585 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 PROM2Q8N271 834 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
HNRNPC-220ENST00000555585 KAZALD1Q96I82 304 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
HNRNPC-220ENST00000555585 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
HNRNPC-220ENST00000555585 NIP7Q9Y221 180 aaKnown RBP eCLIP12□□□□□ -0.49
HNRNPC-220ENST00000555585 C4AP0C0L4 1744 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
HNRNPC-220ENST00000555585 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 NUCB1Q02818 461 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 MTX1Q13505 466 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 CLEC4GQ6UXB4 293 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 CHD1LQ86WJ1 897 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 BCL11AQ9H165 835 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 EXOC6BQ9Y2D4 811 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 RGPD3A6NKT7 1758 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 RGPD4Q7Z3J3 1758 aa11.99□□□□□ -0.49
HNRNPC-220ENST00000555585 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 RGL2O15211 777 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 SURF6O75683 361 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 SUSD4Q5VX71 490 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 AMIGO3Q86WK7 504 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 LNPKQ9C0E8 428 aa11.98□□□□□ -0.49
HNRNPC-220ENST00000555585 CDHR2Q9BYE9 1310 aa11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 SSFA2P28290 1259 aa11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 FOXO4P98177 505 aa11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
HNRNPC-220ENST00000555585 USP42Q9H9J4 1324 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 IRS4O14654 1257 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 SMARCA5O60264 1052 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 RAB11FIP3O75154 756 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 PDE4AP27815 886 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 BAG6P46379 1132 aa11.96□□□□□ -0.49
HNRNPC-220ENST00000555585 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms