RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 VAC14Q08AM6 782 aa8.4□□□□□ -1.06
SRP54-207ENST00000555535 PSAPL1Q6NUJ1 521 aa8.4□□□□□ -1.06
SRP54-207ENST00000555535 IGF2-ASQ6U949 168 aa8.4□□□□□ -1.06
SRP54-207ENST00000555535 SFI1A8K8P3 1242 aa8.39□□□□□ -1.07
SRP54-207ENST00000555535 PSMA6P60900 246 aaKnown RBP8.39□□□□□ -1.07
SRP54-207ENST00000555535 GTF2IP78347 998 aa8.39□□□□□ -1.07
SRP54-207ENST00000555535 LCE1DQ5T752 114 aa8.39□□□□□ -1.07
SRP54-207ENST00000555535 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
SRP54-207ENST00000555535 KRTAP4-7Q9BYR0 210 aa8.39□□□□□ -1.07
SRP54-207ENST00000555535 NOS3P29474 1203 aa8.38□□□□□ -1.07
SRP54-207ENST00000555535 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
SRP54-207ENST00000555535 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
SRP54-207ENST00000555535 ARID1BQ8NFD5 2236 aaPredicted RBP8.37□□□□□ -1.07
SRP54-207ENST00000555535 FSTP19883 344 aa8.37□□□□□ -1.07
SRP54-207ENST00000555535 CD97P48960 835 aa8.37□□□□□ -1.07
SRP54-207ENST00000555535 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
SRP54-207ENST00000555535 DNAJB12Q9NXW2 375 aaKnown RBP8.37□□□□□ -1.07
SRP54-207ENST00000555535 GSC2O15499 205 aa8.36□□□□□ -1.07
SRP54-207ENST00000555535 SUSD3Q96L08 255 aa8.36□□□□□ -1.07
SRP54-207ENST00000555535 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
SRP54-207ENST00000555535 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
SRP54-207ENST00000555535 SSTR4P31391 388 aa8.35□□□□□ -1.07
SRP54-207ENST00000555535 FZD5Q13467 585 aa8.35□□□□□ -1.07
SRP54-207ENST00000555535 NFATC2IPQ8NCF5 419 aa8.35□□□□□ -1.07
SRP54-207ENST00000555535 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
SRP54-207ENST00000555535 NEUROD2Q15784 382 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 POTEAQ6S8J7 498 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 WFDC8Q8IUA0 241 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 MEGF10Q96KG7 1140 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 PHACTR1Q9C0D0 580 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 RNF114Q9Y508 228 aa8.34□□□□□ -1.07
SRP54-207ENST00000555535 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
SRP54-207ENST00000555535 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
SRP54-207ENST00000555535 TBCELQ5QJ74 424 aa8.33□□□□□ -1.08
SRP54-207ENST00000555535 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
SRP54-207ENST00000555535 SH3PXD2AQ5TCZ1 1133 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 TTC9Q92623 222 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 AKTIPQ9H8T0 292 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
SRP54-207ENST00000555535 KIAA1324LA8MWY0 1029 aaPredicted RBP8.31□□□□□ -1.08
SRP54-207ENST00000555535 SKIP12755 728 aa8.31□□□□□ -1.08
SRP54-207ENST00000555535 CCINQ13939 588 aa8.31□□□□□ -1.08
SRP54-207ENST00000555535 ZNF280CQ8ND82 737 aa8.31□□□□□ -1.08
SRP54-207ENST00000555535 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
SRP54-207ENST00000555535 HCN4Q9Y3Q4 1203 aa8.31□□□□□ -1.08
SRP54-207ENST00000555535 GP2P55259 537 aaKnown RBP8.3□□□□□ -1.08
SRP54-207ENST00000555535 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
SRP54-207ENST00000555535 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
SRP54-207ENST00000555535 MAP3K6O95382 1288 aa8.29□□□□□ -1.08
SRP54-207ENST00000555535 EPB42P16452 691 aa8.29□□□□□ -1.08
SRP54-207ENST00000555535 IER5Q5VY09 327 aa8.29□□□□□ -1.08
SRP54-207ENST00000555535 M0R2N6 131 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 NFKB1P19838 968 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 ARID4AP29374 1257 aaPredicted RBP8.28□□□□□ -1.08
SRP54-207ENST00000555535 ABL2P42684 1182 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 ATP1A2P50993 1020 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 BRPF1P55201 1214 aaPredicted RBP8.28□□□□□ -1.08
SRP54-207ENST00000555535 NCOA4Q13772 614 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 ELMSAN1Q6PJG2 1045 aa8.28□□□□□ -1.08
SRP54-207ENST00000555535 SRA1Q9HD15 236 aaKnown RBP8.28□□□□□ -1.08
SRP54-207ENST00000555535 OAS3Q9Y6K5 1087 aaKnown RBP8.28□□□□□ -1.08
SRP54-207ENST00000555535 GRIK5Q16478 980 aa8.27□□□□□ -1.09
SRP54-207ENST00000555535 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.09
SRP54-207ENST00000555535 LPIN3Q9BQK8 851 aa8.27□□□□□ -1.09
SRP54-207ENST00000555535 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
SRP54-207ENST00000555535 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
SRP54-207ENST00000555535 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 DLL1O00548 723 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 CPB1P15086 417 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 GRIK1P39086 918 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
SRP54-207ENST00000555535 IGLV1-40P01703 118 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 PERM1Q5SV97 790 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 MAP4K3Q8IVH8 894 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 TRPM4Q8TD43 1214 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
SRP54-207ENST00000555535 CCDC102BQ68D86 513 aa8.24□□□□□ -1.09
SRP54-207ENST00000555535 GAS2L2Q8NHY3 880 aa8.24□□□□□ -1.09
SRP54-207ENST00000555535 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
SRP54-207ENST00000555535 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
SRP54-207ENST00000555535 DEAF1O75398 565 aaPredicted RBP8.23□□□□□ -1.09
SRP54-207ENST00000555535 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
SRP54-207ENST00000555535 GPLD1P80108 840 aa8.22□□□□□ -1.09
SRP54-207ENST00000555535 Q6ZS46 218 aa8.22□□□□□ -1.09
SRP54-207ENST00000555535 STOML1Q9UBI4 398 aa8.22□□□□□ -1.09
SRP54-207ENST00000555535 TGFBR3LH3BV60 316 aa8.21□□□□□ -1.1
SRP54-207ENST00000555535 DHX32Q7L7V1 743 aaKnown RBP8.21□□□□□ -1.1
SRP54-207ENST00000555535 RBM19Q9Y4C8 960 aaKnown RBP8.21□□□□□ -1.1
SRP54-207ENST00000555535 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
SRP54-207ENST00000555535 PALM3A6NDB9 673 aaPredicted RBP8.19□□□□□ -1.1
SRP54-207ENST00000555535 DHX15O43143 795 aaKnown RBP8.19□□□□□ -1.1
SRP54-207ENST00000555535 MED26O95402 600 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms