RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 EAF2Q96CJ1 260 aaPredicted RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 CHAMP1Q96JM3 812 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 JAKMIP1Q96N16 626 aaKnown RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 TSPY26PQ9H489 355 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 KCNJ4P48050 445 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
RPGRIP1-208ENST00000555489 F13A1P00488 732 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 ATF3P18847 181 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 UBE2HP62256 183 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 NOL7Q9UMY1 257 aaKnown RBP11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 RBM8AQ9Y5S9 174 aaKnown RBP11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 MEGF6O75095 1541 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
RPGRIP1-208ENST00000555489 MYL6BP14649 208 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 MCM5P33992 734 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 SLC39A6Q13433 755 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 ADCK5Q3MIX3 580 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 CCDC183Q5T5S1 534 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 MYD88Q99836 296 aa11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 CCDC8Q9H0W5 538 aaPredicted RBP11.9□□□□□ -0.5
RPGRIP1-208ENST00000555489 COL18A1P39060 1754 aa11.9□□□□□ -0.51
RPGRIP1-208ENST00000555489 JCADQ9P266 1359 aa11.9□□□□□ -0.51
RPGRIP1-208ENST00000555489 GJB2P29033 226 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 CSB-PGBD3P0DP91 1061 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 PDCP20941 246 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 RABL6Q3YEC7 729 aaPredicted RBP11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 SIL1Q9H173 461 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 PARP4Q9UKK3 1724 aaKnown RBP11.89□□□□□ -0.51
RPGRIP1-208ENST00000555489 SLC27A2O14975 620 aa11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 ATP5JP18859 108 aa11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
RPGRIP1-208ENST00000555489 ZNF500O60304 480 aaPredicted RBP11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 LARGE1O95461 756 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 CPA1P15085 419 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 KRT32Q14532 448 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 FOXD4L6Q3SYB3 417 aaPredicted RBP11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 FOXD4L3Q6VB84 417 aaPredicted RBP11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 TLR7Q9NYK1 1049 aaKnown RBP11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 CPDO75976 1380 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 A0A0D9SFI3 127 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 ME3Q16798 604 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 CADPS2Q86UW7 1296 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 MTMR6Q9Y217 621 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
RPGRIP1-208ENST00000555489 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 CYP27B1O15528 508 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 OFD1O75665 1012 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 TPM2P07951 284 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 TERF1P54274 439 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 CABP4P57796 275 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
RPGRIP1-208ENST00000555489 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
RPGRIP1-208ENST00000555489 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms