RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 UBR3Q6ZT12 1888 aa13.51□□□□□ -0.25
GABRB3-208ENST00000555094 MYH3P11055 1940 aa13.51□□□□□ -0.25
GABRB3-208ENST00000555094 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 H7C1W4 665 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 RXRBP28702 533 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 EXOC6BQ9Y2D4 811 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 RGPD3A6NKT7 1758 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-208ENST00000555094 RGPD4Q7Z3J3 1758 aa13.5□□□□□ -0.25
GABRB3-208ENST00000555094 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
GABRB3-208ENST00000555094 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
GABRB3-208ENST00000555094 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-208ENST00000555094 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
GABRB3-208ENST00000555094 COL24A1Q17RW2 1714 aa13.49□□□□□ -0.25
GABRB3-208ENST00000555094 RABL6Q3YEC7 729 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-208ENST00000555094 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
GABRB3-208ENST00000555094 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
GABRB3-208ENST00000555094 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
GABRB3-208ENST00000555094 TRIM37O94972 964 aa13.48□□□□□ -0.25
GABRB3-208ENST00000555094 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
GABRB3-208ENST00000555094 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
GABRB3-208ENST00000555094 ARXQ96QS3 562 aa13.48□□□□□ -0.25
GABRB3-208ENST00000555094 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
GABRB3-208ENST00000555094 CASZ1Q86V15 1759 aa13.47□□□□□ -0.25
GABRB3-208ENST00000555094 APBB1O00213 710 aa13.47□□□□□ -0.25
GABRB3-208ENST00000555094 PCCAP05165 728 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-208ENST00000555094 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
GABRB3-208ENST00000555094 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
GABRB3-208ENST00000555094 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
GABRB3-208ENST00000555094 GPTP24298 496 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 FOXO4P98177 505 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 LRRCC1Q9C099 1032 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.25
GABRB3-208ENST00000555094 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
GABRB3-208ENST00000555094 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
GABRB3-208ENST00000555094 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
GABRB3-208ENST00000555094 RFX5P48382 616 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-208ENST00000555094 ZBTB38Q8NAP3 1195 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-208ENST00000555094 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-208ENST00000555094 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
GABRB3-208ENST00000555094 LRP5O75197 1615 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 RGL2O15211 777 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 GNPATO15228 680 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-208ENST00000555094 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 PLEKHM2Q8IWE5 1019 aa13.44□□□□□ -0.26
GABRB3-208ENST00000555094 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-208ENST00000555094 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
GABRB3-208ENST00000555094 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
GABRB3-208ENST00000555094 LMBR1LQ6UX01 489 aa13.43□□□□□ -0.26
GABRB3-208ENST00000555094 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-208ENST00000555094 PLA2G12BQ9BX93 195 aa13.43□□□□□ -0.26
GABRB3-208ENST00000555094 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 KIF1BPQ96EK5 621 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 FAM89AQ96GI7 184 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 COPRSQ9NQ92 184 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 PARP10Q53GL7 1025 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 AK7Q96M32 723 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
GABRB3-208ENST00000555094 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
GABRB3-208ENST00000555094 NTSR2O95665 410 aa13.41□□□□□ -0.26
GABRB3-208ENST00000555094 PTPN12Q05209 780 aaKnown RBP13.41□□□□□ -0.26
GABRB3-208ENST00000555094 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-208ENST00000555094 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
GABRB3-208ENST00000555094 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
GABRB3-208ENST00000555094 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
GABRB3-208ENST00000555094 SRP68Q9UHB9 627 aaKnown RBP13.41□□□□□ -0.26
GABRB3-208ENST00000555094 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
GABRB3-208ENST00000555094 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
GABRB3-208ENST00000555094 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
GABRB3-208ENST00000555094 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
GABRB3-208ENST00000555094 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
GABRB3-208ENST00000555094 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
GABRB3-208ENST00000555094 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
GABRB3-208ENST00000555094 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
GABRB3-208ENST00000555094 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-208ENST00000555094 PLSCR1O15162 318 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 SASH1O94885 1247 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 CSF1RP07333 972 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 PDE1AP54750 535 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 CTSWP56202 376 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 USPL1Q5W0Q7 1092 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 PROM2Q8N271 834 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
GABRB3-208ENST00000555094 UTP14AQ9BVJ6 771 aaKnown RBP13.39□□□□□ -0.27
GABRB3-208ENST00000555094 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
GABRB3-208ENST00000555094 SIL1Q9H173 461 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms