RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.042e-7■□□□□ 10.2
ACTN1-214ENST00000555075 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
ACTN1-214ENST00000555075 C10orf71Q711Q0 1435 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
ACTN1-214ENST00000555075 UBN2Q6ZU65 1347 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 DPEP1P16444 411 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 RARSP54136 660 aaKnown RBP15.28■□□□□ 0.04
ACTN1-214ENST00000555075 ERFEQ4G0M1 354 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-214ENST00000555075 RPGRQ92834 1020 aaKnown RBP15.28■□□□□ 0.04
ACTN1-214ENST00000555075 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 ISCA1Q9BUE6 129 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
ACTN1-214ENST00000555075 PIM2Q9P1W9 311 aa15.28■□□□□ 0.04
ACTN1-214ENST00000555075 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-214ENST00000555075 F6X3S4 739 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 GRIN3BO60391 1043 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 NTSR2O95665 410 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 CHRNA5P30532 468 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 LINS1Q8NG48 757 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-214ENST00000555075 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
ACTN1-214ENST00000555075 BCS1LQ9Y276 419 aa15.27■□□□□ 0.04
ACTN1-214ENST00000555075 ADCY9O60503 1353 aa15.26■□□□□ 0.03
ACTN1-214ENST00000555075 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
ACTN1-214ENST00000555075 DALRD3Q5D0E6 543 aaKnown RBP15.26■□□□□ 0.03
ACTN1-214ENST00000555075 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
ACTN1-214ENST00000555075 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
ACTN1-214ENST00000555075 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-214ENST00000555075 NUP98P52948 1817 aa15.25■□□□□ 0.03
ACTN1-214ENST00000555075 CWF19L2Q2TBE0 894 aaKnown RBP15.25■□□□□ 0.03
ACTN1-214ENST00000555075 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
ACTN1-214ENST00000555075 CNKSR1Q969H4 720 aa15.25■□□□□ 0.03
ACTN1-214ENST00000555075 MASTLQ96GX5 879 aa15.25■□□□□ 0.03
ACTN1-214ENST00000555075 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
ACTN1-214ENST00000555075 NEURL1BA8MQ27 555 aa15.24■□□□□ 0.03
ACTN1-214ENST00000555075 IRS4O14654 1257 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-214ENST00000555075 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-214ENST00000555075 HCLS1P14317 486 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-214ENST00000555075 NPR1P16066 1061 aa15.24■□□□□ 0.03
ACTN1-214ENST00000555075 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
ACTN1-214ENST00000555075 ALDH1B1P30837 517 aa15.23■□□□□ 0.03
ACTN1-214ENST00000555075 ZKSCAN2Q63HK3 967 aa15.23■□□□□ 0.03
ACTN1-214ENST00000555075 STYK1Q6J9G0 422 aa15.23■□□□□ 0.03
ACTN1-214ENST00000555075 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
ACTN1-214ENST00000555075 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
ACTN1-214ENST00000555075 ARFGEF2Q9Y6D5 1785 aa15.23■□□□□ 0.03
ACTN1-214ENST00000555075 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 BCAR3O75815 825 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 ALDH1L1O75891 902 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
ACTN1-214ENST00000555075 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-214ENST00000555075 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-214ENST00000555075 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-214ENST00000555075 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
ACTN1-214ENST00000555075 KIAA1551Q9HCM1 1747 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 MS4A1P11836 297 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 GCKRQ14397 625 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 SLC10A5Q5PT55 438 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 CACNA1FO60840 1977 aa15.21■□□□□ 0.03
ACTN1-214ENST00000555075 AFDNP55196 1824 aaKnown RBP15.21■□□□□ 0.03
ACTN1-214ENST00000555075 ABCC12Q96J65 1359 aa15.21■□□□□ 0.02
ACTN1-214ENST00000555075 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.02
ACTN1-214ENST00000555075 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 PDE8AO60658 829 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 SRGNP10124 158 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-214ENST00000555075 CCDC152Q4G0S7 254 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 ATF7IPQ6VMQ6 1270 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
ACTN1-214ENST00000555075 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-214ENST00000555075 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
ACTN1-214ENST00000555075 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
ACTN1-214ENST00000555075 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
ACTN1-214ENST00000555075 CDHR2Q9BYE9 1310 aa15.18■□□□□ 0.02
ACTN1-214ENST00000555075 GRM8O00222 908 aa15.18■□□□□ 0.02
ACTN1-214ENST00000555075 SOGA3Q5TF21 947 aa15.18■□□□□ 0.02
ACTN1-214ENST00000555075 H7C1W4 665 aa15.17■□□□□ 0.02
ACTN1-214ENST00000555075 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
ACTN1-214ENST00000555075 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-214ENST00000555075 RIC1Q4ADV7 1423 aa15.17■□□□□ 0.02
ACTN1-214ENST00000555075 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-214ENST00000555075 C21orf2O43822 256 aa15.16■□□□□ 0.02
ACTN1-214ENST00000555075 KCNA3P22001 575 aa15.16■□□□□ 0.02
ACTN1-214ENST00000555075 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
ACTN1-214ENST00000555075 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
ACTN1-214ENST00000555075 CRAMP1Q96RY5 1269 aa15.16■□□□□ 0.02
ACTN1-214ENST00000555075 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-214ENST00000555075 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-214ENST00000555075 TRIM27P14373 513 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms