RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MYCBPQ99417 103 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-203ENST00000554873 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-203ENST00000554873 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
SYNE3-203ENST00000554873 C10orf67Q8IYJ2 551 aa18.46■□□□□ 0.55
SYNE3-203ENST00000554873 TOPAZ1Q8N9V7 1692 aa18.46■□□□□ 0.55
SYNE3-203ENST00000554873 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
SYNE3-203ENST00000554873 PLA2G4AP47712 749 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 ZNF75DP51815 510 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 CACTINQ8WUQ7 758 aaKnown RBP18.45■□□□□ 0.54
SYNE3-203ENST00000554873 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
SYNE3-203ENST00000554873 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 NCAPGQ9BPX3 1015 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 TMX1Q9H3N1 280 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 TCHHQ07283 1943 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 FIBPO43427 364 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 APPP05067 770 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 HSPA4P34932 840 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
SYNE3-203ENST00000554873 CWC15Q9P013 229 aaKnown RBP18.45■□□□□ 0.54
SYNE3-203ENST00000554873 RAD50Q92878 1312 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 TRIM5Q9C035 493 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 LUZP1Q86V48 1076 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 TNRQ92752 1358 aa18.44■□□□□ 0.54
SYNE3-203ENST00000554873 XRN1Q8IZH2 1706 aaKnown RBP18.43■□□□□ 0.54
SYNE3-203ENST00000554873 TRIM66O15016 1216 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 MAP4K4O95819 1239 aaPredicted RBP18.43■□□□□ 0.54
SYNE3-203ENST00000554873 UBTFL1P0CB47 393 aaPredicted RBP18.43■□□□□ 0.54
SYNE3-203ENST00000554873 LTKP29376 864 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 GPS2Q13227 327 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 AOX1Q06278 1338 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 GUCY2CP25092 1073 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 MRVI1Q9Y6F6 885 aa18.43■□□□□ 0.54
SYNE3-203ENST00000554873 CLCN6P51797 869 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 ZSCAN26Q16670 478 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 NEMFO60524 1076 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 GOLGA6L1Q8N7Z2 621 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 SOS1Q07889 1333 aaPredicted RBP18.42■□□□□ 0.54
SYNE3-203ENST00000554873 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
SYNE3-203ENST00000554873 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 TYRO3Q06418 890 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 PPP1R42Q7Z4L9 355 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 CLIP2Q9UDT6 1046 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 SURF6O75683 361 aaKnown RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 GYS2P54840 703 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 USP27XA6NNY8 438 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 KIF2AO00139 706 aaPredicted RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 F13A1P00488 732 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 MAP3K11Q16584 847 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 NGDNQ8NEJ9 315 aaKnown RBP18.41■□□□□ 0.54
SYNE3-203ENST00000554873 LCMT1Q9UIC8 334 aa18.41■□□□□ 0.54
SYNE3-203ENST00000554873 PI4K2BQ8TCG2 481 aa18.4■□□□□ 0.54
SYNE3-203ENST00000554873 ZNF622Q969S3 477 aaKnown RBP eCLIP18.4■□□□□ 0.54
SYNE3-203ENST00000554873 CBX8Q9HC52 389 aa18.4■□□□□ 0.54
SYNE3-203ENST00000554873 NPHP1O15259 732 aa18.4■□□□□ 0.54
SYNE3-203ENST00000554873 POLR3GO15318 223 aaPredicted RBP18.4■□□□□ 0.54
SYNE3-203ENST00000554873 STX6O43752 255 aa18.4■□□□□ 0.54
SYNE3-203ENST00000554873 CDC25BP30305 580 aa18.4■□□□□ 0.54
SYNE3-203ENST00000554873 SGSM2O43147 1006 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 RAB11FIP3O75154 756 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.53
SYNE3-203ENST00000554873 POLA2Q14181 598 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 SRLQ86TD4 932 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 LRRC8AQ8IWT6 810 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 RHPN1Q8TCX5 695 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 SMARCE1Q969G3 411 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
SYNE3-203ENST00000554873 PTPRUQ92729 1446 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 ERCC6LQ2NKX8 1250 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 CCDC144BQ3MJ40 725 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.53
SYNE3-203ENST00000554873 TDRD7Q8NHU6 1098 aaKnown RBP18.39■□□□□ 0.53
SYNE3-203ENST00000554873 LARP6Q9BRS8 491 aaKnown RBP18.38■□□□□ 0.53
SYNE3-203ENST00000554873 ELP1O95163 1332 aa18.38■□□□□ 0.53
SYNE3-203ENST00000554873 HDGFL1Q5TGJ6 251 aa18.38■□□□□ 0.53
SYNE3-203ENST00000554873 RASEFQ8IZ41 740 aa18.38■□□□□ 0.53
SYNE3-203ENST00000554873 TTC14Q96N46 770 aa18.38■□□□□ 0.53
SYNE3-203ENST00000554873 L2HGDHQ9H9P8 463 aa18.38■□□□□ 0.53
SYNE3-203ENST00000554873 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
SYNE3-203ENST00000554873 SYT1P21579 422 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 NLRP6P59044 892 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 ST5P78524 1137 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
SYNE3-203ENST00000554873 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
SYNE3-203ENST00000554873 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 GOLGA5Q8TBA6 731 aa18.37■□□□□ 0.53
SYNE3-203ENST00000554873 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms