RNA–Protein interactions for RNA: ENST00000554497.1

TMEM30B-201, Transcript of transmembrane protein 30B, humanhuman

TSL 4

Gene TMEM30B, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-201ENST00000554497 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
TMEM30B-201ENST00000554497 HMOX1P09601 288 aa16.74■□□□□ 0.27
TMEM30B-201ENST00000554497 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
TMEM30B-201ENST00000554497 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
TMEM30B-201ENST00000554497 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
TMEM30B-201ENST00000554497 NOGQ13253 232 aa16.73■□□□□ 0.27
TMEM30B-201ENST00000554497 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
TMEM30B-201ENST00000554497 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
TMEM30B-201ENST00000554497 RALBP1Q15311 655 aa16.72■□□□□ 0.27
TMEM30B-201ENST00000554497 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
TMEM30B-201ENST00000554497 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
TMEM30B-201ENST00000554497 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
TMEM30B-201ENST00000554497 GPRC5DQ9NZD1 345 aa16.72■□□□□ 0.27
TMEM30B-201ENST00000554497 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
TMEM30B-201ENST00000554497 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
TMEM30B-201ENST00000554497 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
TMEM30B-201ENST00000554497 SLC51AQ86UW1 340 aa16.71■□□□□ 0.27
TMEM30B-201ENST00000554497 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
TMEM30B-201ENST00000554497 CC2D2BQ6DHV5 1058 aa16.69■□□□□ 0.26
TMEM30B-201ENST00000554497 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
TMEM30B-201ENST00000554497 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
TMEM30B-201ENST00000554497 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
TMEM30B-201ENST00000554497 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 ABCC12Q96J65 1359 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 TEFQ10587 303 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 PGAP2Q9UHJ9 254 aa16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
TMEM30B-201ENST00000554497 ANP32CO43423 234 aa16.67■□□□□ 0.26
TMEM30B-201ENST00000554497 KCNQ3O43525 872 aa16.67■□□□□ 0.26
TMEM30B-201ENST00000554497 HUNKP57058 714 aa16.67■□□□□ 0.26
TMEM30B-201ENST00000554497 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
TMEM30B-201ENST00000554497 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
TMEM30B-201ENST00000554497 FAM155AB1AL88 458 aaPredicted RBP16.66■□□□□ 0.26
TMEM30B-201ENST00000554497 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
TMEM30B-201ENST00000554497 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
TMEM30B-201ENST00000554497 RNF186Q9NXI6 227 aa16.66■□□□□ 0.26
TMEM30B-201ENST00000554497 PRAMEF22A3QJZ6 481 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 TRPA1O75762 1119 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 GMPSP49915 693 aaPredicted RBP16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 CXCL9Q07325 125 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 DLK2Q6UY11 383 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
TMEM30B-201ENST00000554497 PPIP5K2O43314 1243 aa16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 AOC3Q16853 763 aa16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 TRPM4Q8TD43 1214 aa16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
TMEM30B-201ENST00000554497 HLFQ16534 295 aa16.63■□□□□ 0.25
TMEM30B-201ENST00000554497 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
TMEM30B-201ENST00000554497 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
TMEM30B-201ENST00000554497 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
TMEM30B-201ENST00000554497 NUTM1Q86Y26 1132 aa16.63■□□□□ 0.25
TMEM30B-201ENST00000554497 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 RGL2O15211 777 aa16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
TMEM30B-201ENST00000554497 SHTN1A0MZ66 631 aa16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 NBPF10Q6P3W6 841 aaKnown RBP16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 ZNRF3Q9ULT6 936 aa16.61■□□□□ 0.25
TMEM30B-201ENST00000554497 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
TMEM30B-201ENST00000554497 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
TMEM30B-201ENST00000554497 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
TMEM30B-201ENST00000554497 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
TMEM30B-201ENST00000554497 CCDC102AQ96A19 550 aa16.59■□□□□ 0.25
TMEM30B-201ENST00000554497 GBA2Q9HCG7 927 aaPredicted RBP16.59■□□□□ 0.25
TMEM30B-201ENST00000554497 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
TMEM30B-201ENST00000554497 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
TMEM30B-201ENST00000554497 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
TMEM30B-201ENST00000554497 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
TMEM30B-201ENST00000554497 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.24
TMEM30B-201ENST00000554497 NUP98P52948 1817 aa16.58■□□□□ 0.24
TMEM30B-201ENST00000554497 RAD17O75943 681 aa16.57■□□□□ 0.24
TMEM30B-201ENST00000554497 ZNF157P51786 506 aaPredicted RBP16.57■□□□□ 0.24
TMEM30B-201ENST00000554497 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
TMEM30B-201ENST00000554497 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
TMEM30B-201ENST00000554497 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
TMEM30B-201ENST00000554497 SLC10A3P09131 477 aa16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 C2orf69Q8N8R5 385 aa16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 CNOT7Q9UIV1 285 aaKnown RBP16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 NUDCQ9Y266 331 aa16.56■□□□□ 0.24
TMEM30B-201ENST00000554497 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
TMEM30B-201ENST00000554497 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms