RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 H2AFXP16104 143 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 PECAM1P16284 738 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 IFT88Q13099 833 aa10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 PSMD2Q13200 908 aa10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 KLHL10Q6JEL2 608 aa10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 MKRN1Q9UHC7 482 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 KDM5AP29375 1690 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-211ENST00000554455 ZCCHC11Q5TAX3 1644 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 ZFYVE16Q7Z3T8 1539 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 A0A087WUV0 522 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 ZSCAN9O15535 394 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 RHBDL3P58872 404 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 PSMC1P62191 440 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 DDR1Q08345 913 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 TCP11Q8WWU5 503 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 MYOM2P54296 1465 aa10.05□□□□□ -0.8
HNRNPC-211ENST00000554455 EXOC5O00471 708 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 TRPC1P48995 793 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 CCDC181Q5TID7 509 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 GBP6Q6ZN66 633 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 SAMD3Q8N6K7 520 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 TDRD7Q8NHU6 1098 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 ERO1AQ96HE7 468 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 HOMER3Q9NSC5 361 aa10.04□□□□□ -0.8
HNRNPC-211ENST00000554455 IPO5O00410 1097 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 MICAL1Q8TDZ2 1067 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 RMDN2Q96LZ7 410 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 TRPV5Q9NQA5 729 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 ST7Q9NRC1 585 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 MYO3AQ8NEV4 1616 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 RPGRIP1LQ68CZ1 1315 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 SFSWAPQ12872 951 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 FOXD4Q12950 439 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 HHATQ5VTY9 493 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 DUSP27Q5VZP5 1158 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 CCDC112Q8NEF3 446 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 SMCR8Q8TEV9 937 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 SMARCE1Q969G3 411 aa10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-211ENST00000554455 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.8
HNRNPC-211ENST00000554455 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 EIF5P55010 431 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 NUTM2GQ5VZR2 741 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 APBB1IPQ7Z5R6 666 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 TRMT2AQ8IZ69 625 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 TRIM7Q9C029 511 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 USP25Q9UHP3 1055 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
HNRNPC-211ENST00000554455 U2SURPO15042 1029 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 PNMA6AP0CW24 399 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 RAB27AP51159 221 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 GJC2Q5T442 439 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 SDCCAG8Q86SQ7 713 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 SLC24A3Q9HC58 644 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 CLIP2Q9UDT6 1046 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 MBD3O95983 291 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 VDRP11473 427 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 GPTP24298 496 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 CCDC15Q0P6D6 951 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 ACBD5Q5T8D3 534 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 RBM26Q5T8P6 1007 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 MFSD4BQ5TF39 518 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 MYLK4Q86YV6 388 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 TEKT1Q969V4 418 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 FAM163AQ96GL9 167 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 LMBRD1Q9NUN5 540 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 LMCD1Q9NZU5 365 aa10.01□□□□□ -0.81
HNRNPC-211ENST00000554455 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
HNRNPC-211ENST00000554455 ELP1O95163 1332 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 PLIN1O60240 522 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 CCNHP51946 323 aaPredicted RBP10□□□□□ -0.81
HNRNPC-211ENST00000554455 MNAT1P51948 309 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 DEUP1Q05D60 604 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 SLFN5Q08AF3 891 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 PREPLQ4J6C6 727 aaPredicted RBP10□□□□□ -0.81
HNRNPC-211ENST00000554455 WDR78Q5VTH9 848 aa10□□□□□ -0.81
HNRNPC-211ENST00000554455 SPATA21Q7Z572 469 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms